RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 B3GALT5-AS1P59052 145 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 COPZ1P61923 177 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 EEF1A1P68104 462 aaKnown RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 HOXC5Q00444 222 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 CRYZQ08257 329 aaKnown RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 FOXF1Q12946 379 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 ERICH5Q6P6B1 374 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 C16orf89Q6UX73 402 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 HACD2Q6Y1H2 254 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 CALHM3Q86XJ0 350 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 PM20D2Q8IYS1 436 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 MICU2Q8IYU8 434 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 OR10Q1Q8NGQ4 319 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 OIT3Q8WWZ8 545 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 TMEM234Q8WY98 164 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 FIG4Q92562 907 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 KCTD14Q9BQ13 255 aaPredicted RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 SPAG4Q9NPE6 437 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 KLHL28Q9NXS3 571 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 DNAJB12Q9NXW2 375 aaKnown RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 GPC6Q9Y625 555 aaPredicted RBP13.17□□□□□ -0.3
SGCE-204ENST00000428696 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
SGCE-204ENST00000428696 MYO18BQ8IUG5 2567 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 NCKAP5O14513 1909 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 FIGNL2A6NMB9 653 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 H0YC42 278 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 TPST1O60507 370 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 SEMA7AO75326 666 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 STSP08842 583 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 PRG2P13727 222 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 ACVR2AP27037 513 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 SFTPDP35247 375 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 EIF1P41567 113 aaKnown RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 TPD52P55327 224 aaPredicted RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 SESN3P58005 492 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 CBX1P83916 185 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 PMPCAQ10713 525 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 SGCBQ16585 318 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 GLYR1Q49A26 553 aaPredicted RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 LRRC23Q53EV4 343 aaPredicted RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 EMC4Q5J8M3 183 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 AP1ARQ63HQ0 302 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 PATL1Q86TB9 770 aaKnown RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 ZNF440Q8IYI8 595 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 DEFB107AQ8IZN7 70 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 LILRA2Q8N149 483 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 MEIOBQ8N635 442 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 WDYHV1Q96HA8 205 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 TRIB1Q96RU8 372 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 CDRT15Q96T59 188 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
SGCE-204ENST00000428696 ALG2Q9H553 416 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 SLC5A6Q9Y289 635 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 ESPL1Q14674 2120 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
SGCE-204ENST00000428696 FAM220BPB1ANY3 271 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 EIF1AYO14602 144 aaKnown RBP13.15□□□□□ -0.3
SGCE-204ENST00000428696 GMNNO75496 209 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 MFN2O95140 757 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 IFNA14P01570 189 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 TFPIP10646 304 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 PRKCAP17252 672 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 IL11P20809 199 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 PRKAR1BP31321 381 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 GSK3BP49841 420 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 DMTNQ08495 405 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 FOXD4Q12950 439 aaPredicted RBP13.15□□□□□ -0.3
SGCE-204ENST00000428696 ZSWIM7Q19AV6 140 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 C4orf17Q53FE4 359 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 RNF220Q5VTB9 566 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 FAM91A1Q658Y4 838 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 RPTNQ6XPR3 784 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 Q6ZPB1 254 aaPredicted RBP13.15□□□□□ -0.3
SGCE-204ENST00000428696 ULK2Q8IYT8 1036 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 EID3Q8N140 333 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 GTPBP8Q8N3Z3 284 aaPredicted RBP13.15□□□□□ -0.3
SGCE-204ENST00000428696 VANGL1Q8TAA9 524 aaPredicted RBP13.15□□□□□ -0.3
SGCE-204ENST00000428696 POC1BQ8TC44 478 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 ZNF524Q96C55 264 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 DNAJA3Q96EY1 480 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 TPD52L3Q96J77 140 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 PRR14Q9BWN1 585 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 EXOSC3Q9NQT5 275 aaKnown RBP13.15□□□□□ -0.3
SGCE-204ENST00000428696 NDE1Q9NXR1 346 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 RPS6KB2Q9UBS0 482 aa13.15□□□□□ -0.3
SGCE-204ENST00000428696 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 AHRRA9YTQ3 701 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 LINC01387J3KSC0 135 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 GCM2O75603 506 aaPredicted RBP13.14□□□□□ -0.31
SGCE-204ENST00000428696 GABRA1P14867 456 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 NCK1P16333 377 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 CALB2P22676 271 aa13.14□□□□□ -0.31
SGCE-204ENST00000428696 MSX2P35548 267 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms