RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SUMO3P55854 103 aaPredicted RBP16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 SELENBP1Q13228 472 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 LASP1Q14847 261 aaKnown RBP16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 NDUFAF6Q330K2 333 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 CFAP157Q5JU67 520 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 C11orf71Q6IPW1 123 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 SLC22A25Q6T423 547 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 Q6ZSR9 355 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 SSX8Q7RTT4 187 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF100Q8IYN0 542 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 FBXL14Q8N1E6 418 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 TMCO5AQ8N6Q1 288 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF525Q8N782 197 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF614Q8N883 585 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 RFWD2Q8NHY2 731 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 GPR119Q8TDV5 335 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 RADILQ96JH8 1075 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF300Q96RE9 604 aaPredicted RBP16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 CCT7Q99832 543 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 SHARPINQ9H0F6 387 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 HEATR1Q9H583 2144 aaKnown RBP16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 DUSP22Q9NRW4 184 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 CBLN4Q9NTU7 201 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZCCHC3Q9NUD5 404 aaKnown RBP16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 TMEM160Q9NX00 188 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 ICAM5Q9UMF0 924 aa16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 NUP214P35658 2090 aaPredicted RBP16.17■□□□□ 0.18
UPK3BP1-201ENST00000428678 OR5H1A6NKK0 313 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 ELOA3DA6NLF2 546 aaPredicted RBP16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 E7EQL1 145 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 NPIPB8E9PQR5 432 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 TBX19O60806 448 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 HMGN2P05204 90 aaKnown RBP16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 UROSP10746 265 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 SLC25A16P16260 332 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF16P17020 682 aaPredicted RBP16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 COX5AP20674 150 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 FRKP42685 505 aaPredicted RBP16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 SPOCK1Q08629 439 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 ELOA3BQ3SY89 546 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 KLHL26Q53HC5 615 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 CLEC6AQ6EIG7 209 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 CDC73Q6P1J9 531 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 TMEM108Q6UXF1 575 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZYG11AQ6WRX3 759 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 P2RY8Q86VZ1 359 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 ELOA3Q8NG57 546 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 ACMSDQ8TDX5 336 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 FAM168AQ92567 244 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 FAM120BQ96EK7 910 aaKnown RBP16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 MRGPRX4Q96LA9 322 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 OR5B2Q96R09 309 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 DHRS9Q9BPW9 319 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 BAIAP2L1Q9UHR4 511 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 EMCNQ9ULC0 261 aa16.16■□□□□ 0.18
UPK3BP1-201ENST00000428678 G3V2L1 256 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 SLC28A1O00337 649 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 SMAD9O15198 467 aaKnown RBP16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 CYTIPO60759 359 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 PRPH2P23942 346 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 ECHS1P30084 290 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF83P51522 516 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 CCR4P51679 360 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 NAA20P61599 178 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 CHRNEQ04844 493 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 PDE7AQ13946 482 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 ARL13AQ5H913 290 aaPredicted RBP16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 EXOSC6Q5RKV6 272 aaKnown RBP16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 CYB5R2Q6BCY4 276 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 GALNT5Q7Z7M9 940 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 MUC15Q8N387 334 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 ZNF433Q8N7K0 673 aaPredicted RBP16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 STACQ99469 402 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 C19orf24Q9BVV8 132 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 HOXD1Q9GZZ0 328 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 PIGUQ9H490 435 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 ANKZF1Q9H8Y5 726 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 SIRT3Q9NTG7 399 aaPredicted RBP16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 MGAT4BQ9UQ53 548 aa16.15■□□□□ 0.18
UPK3BP1-201ENST00000428678 GOLGA8QA0A0J9YX86 632 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 CIB4A0PJX0 185 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 GOLGA8OA6NCC3 632 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 ZNF724A8MTY0 619 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 GOLGA8NF8WBI6 632 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 RAD51DO75771 328 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 PGM3O95394 542 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 IGHV3-9P01782 118 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 ABHD2P08910 425 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 DHRS4L1P0CG22 281 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 IGHV4-31P0DP07 118 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 FABP6P51161 128 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 RPL38P63173 70 aaKnown RBP16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 QPRTQ15274 297 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 DCST2Q5T1A1 773 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 KLHL17Q6TDP4 642 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 UBE2J2Q8N2K1 259 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 TOR1AIP2Q8NFQ8 470 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 OR52N5Q8NH56 324 aa16.14■□□□□ 0.17
UPK3BP1-201ENST00000428678 ZNF75CPQ92670 426 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms