RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 CLIP4Q8N3C7 705 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 WDSUB1Q8N9V3 476 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 ZNF583Q96ND8 569 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 MCHR1Q99705 422 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 SPATA9Q9BWV2 254 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 RTN4RQ9BZR6 473 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 MED17Q9NVC6 651 aa6.38□□□□□ -1.39
CDC7-203ENST00000428239 SPIN1Q9Y657 262 aaPredicted RBP6.38□□□□□ -1.39
CDC7-203ENST00000428239 TRBV5-3A0A0A0MS03 114 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 LRRC3CA6NJW4 275 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 CCL21O00585 134 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 KPNA4O00629 521 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 DNAJA2O60884 412 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SYNGR4O95473 234 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SESN3P58005 492 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 DMTNQ08495 405 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 FLOT2Q14254 428 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 FGFBP1Q14512 234 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 KLHL26Q53HC5 615 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 CMPK2Q5EBM0 449 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 PDSS1Q5T2R2 415 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 C1orf146Q5VVC0 180 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 RPUSD3Q6P087 351 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 HACD2Q6Y1H2 254 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 CYP4Z1Q86W10 505 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 DHFR2Q86XF0 187 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 PTOV1Q86YD1 416 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 EID3Q8N140 333 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SLC25A36Q96CQ1 311 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 C1GALT1C1Q96EU7 318 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 GPR137Q96N19 417 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 TRIB1Q96RU8 372 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 BTBD10Q9BSF8 475 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 PRR14Q9BWN1 585 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 RYDENQ9NUL5 291 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 TAS2R1Q9NYW7 299 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 MAGEL2Q9UJ55 1249 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 TINAGQ9UJW2 476 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SNX13Q9Y5W8 968 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SPTAN1Q13813 2472 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 OR2M5A3KFT3 312 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 TRIM3O75382 744 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 DNAJC8O75937 253 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 IFNW1P05000 195 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 EDN3P14138 238 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 MAP3K8P41279 467 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 EIF1P41567 113 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 FOXK1P85037 733 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 GANABQ14697 944 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 TOMM34Q15785 309 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 ZNF141Q15928 474 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 FGD3Q5JSP0 725 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 CARM1Q86X55 608 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 LILRA2Q8N149 483 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 BHLHE22Q8NFJ8 381 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 TAPBPLQ9BX59 468 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 PINK1Q9BXM7 581 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 LAT2Q9GZY6 243 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 ITPR1Q14643 2758 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 A0A1W2PQD3 144 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 GJE1A6NN92 205 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SORBS2O94875 1100 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 ZIC2O95409 532 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 FESP07332 822 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 THBS1P07996 1170 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 CBLP22681 906 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 TACR3P29371 465 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 UQCRFS1P47985 274 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 FOXO1Q12778 655 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 DUSP7Q16829 419 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 ALG10BQ5I7T1 473 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 ZNF771Q7L3S4 317 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 VTCN1Q7Z7D3 282 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 CMIPQ8IY22 773 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 NEIL3Q8TAT5 605 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 ZHX1-C8orf76Q96EF9 292 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 FNDC11Q9BVV2 318 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 BCL2L10Q9HD36 194 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 KCNE5Q9UJ90 142 aa6.37□□□□□ -1.39
CDC7-203ENST00000428239 SAMD4AQ9UPU9 718 aaKnown RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 GPC6Q9Y625 555 aaPredicted RBP6.37□□□□□ -1.39
CDC7-203ENST00000428239 FASNP49327 2511 aaKnown RBP6.36□□□□□ -1.39
CDC7-203ENST00000428239 hCG_2039718K7EN88 272 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 MT-ND1P03886 318 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 NGFRP08138 427 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 BMP2P12643 396 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 PRG2P13727 222 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 NQO1P15559 274 aaKnown RBP6.36□□□□□ -1.39
CDC7-203ENST00000428239 PRKAR1BP31321 381 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 VEZF1Q14119 521 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 SF3B4Q15427 424 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDC7-203ENST00000428239 IFI44LQ53G44 452 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 TRILQ7L0X0 811 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 P3H2Q8IVL5 708 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 PM20D2Q8IYS1 436 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 CNEP1R1Q8N9A8 125 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 TAMM41Q96BW9 452 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 HSH2DQ96JZ2 352 aa6.36□□□□□ -1.39
CDC7-203ENST00000428239 TIGARQ9NQ88 270 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms