RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HNRNPCL2B2RXH8 293 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 HNRNPCL3B7ZW38 293 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 GTPBP1O00178 669 aaKnown RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 HNRNPCL1O60812 293 aaKnown RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 FZD7O75084 574 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 NME6O75414 186 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TNFSF13O75888 250 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 CSTAP01040 98 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TFPTP0C1Z6 253 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 HNRNPCL4P0DMR1 293 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TMIGD3P0DMS9 266 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 KITP10721 976 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 PRKCAP17252 672 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 GPX2P18283 190 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 AQP5P55064 265 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 RAC3P60763 192 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 CDSNQ15517 529 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 CD226Q15762 336 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 CTU2Q2VPK5 515 aaKnown RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 HSP90B2PQ58FF3 399 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 CCNJQ5T5M9 372 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 NXNQ6DKJ4 435 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 OR5M10Q6IEU7 315 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 C3orf33Q6P1S2 294 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 C3P1Q6ZMU1 363 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF621Q6ZSS3 439 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 FAM214BQ7L5A3 538 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 GRINAQ7Z429 371 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 CCDC71Q8IV32 467 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 RELL2Q8NC24 303 aaPredicted RBP8.22□□□□□ -1.09
SMC1A-203ENST00000428014 NAXEQ8NCW5 288 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TNIP2Q8NFZ5 429 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 OR5D16Q8NGK9 328 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 OR5AK3PQ8NH89 298 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 PHOSPHO1Q8TCT1 267 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 XAGE5Q8WWM1 108 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 PPP1R36Q96LQ0 422 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 KLHL15Q96M94 604 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TRIB1Q96RU8 372 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 SLC38A1Q9H2H9 487 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TMEM38AQ9H6F2 299 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 A4GALTQ9NPC4 353 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 PLSCR4Q9NRQ2 329 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 SERINC1Q9NRX5 453 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 FBXO34Q9NWN3 711 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 ZNF446Q9NWS9 450 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 FLRT3Q9NZU0 649 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 TNFRSF10DQ9UBN6 386 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 L3MBTL1Q9Y468 752 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 KCNE3Q9Y6H6 103 aa8.22□□□□□ -1.09
SMC1A-203ENST00000428014 A0A1W2PNV4 684 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF208O43345 1280 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 FCMRO60667 390 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 SS18L1O75177 396 aaPredicted RBP8.21□□□□□ -1.1
SMC1A-203ENST00000428014 H6PDO95479 791 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 OR12D1P0DN82 309 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 PPP3CBP16298 524 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 EFNA1P20827 205 aaPredicted RBP8.21□□□□□ -1.1
SMC1A-203ENST00000428014 GRNP28799 593 aaKnown RBP8.21□□□□□ -1.1
SMC1A-203ENST00000428014 RFX3P48380 749 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 DGKQP52824 942 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 RBBP4Q09028 425 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 FUT5Q11128 374 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 RGNQ15493 299 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 PDZK1Q5T2W1 519 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 CBLN3Q6UW01 205 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 C5orf46Q6UWT4 87 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 ARSKQ6UWY0 536 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 MEX3BQ6ZN04 569 aaKnown RBP8.21□□□□□ -1.1
SMC1A-203ENST00000428014 RNF130Q86XS8 419 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 LIX1LQ8IVB5 337 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 FUNDC1Q8IVP5 155 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 SLC30A8Q8IWU4 369 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 MCEMP1Q8IX19 187 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 PEX5LQ8IYB4 626 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 C9orf106Q8NAJ2 232 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 OR6K3Q8NGY3 331 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 OR2V1Q8NHB1 315 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 POC1BQ8TC44 478 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 RNF128Q8TEB7 428 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 HPS1Q92902 700 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 SPDL1Q96EA4 605 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 CHMP6Q96FZ7 201 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 DACH2Q96NX9 599 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 YIPF4Q9BSR8 244 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 SPATA9Q9BWV2 254 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 PAIP1Q9H074 479 aaKnown RBP8.21□□□□□ -1.1
SMC1A-203ENST00000428014 C12orf10Q9HB07 376 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 ALKBH4Q9NXW9 302 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 KCNE5Q9UJ90 142 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 LEF1Q9UJU2 399 aaPredicted RBP8.21□□□□□ -1.1
SMC1A-203ENST00000428014 TRAPPC4Q9Y296 219 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 HDGFL3Q9Y3E1 203 aa8.21□□□□□ -1.1
SMC1A-203ENST00000428014 CCDC168Q8NDH2 2452 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CDHR4A6H8M9 788 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 BBIP1A8MTZ0 92 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 C19orf84I3L1E1 186 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CLIC1O00299 241 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 ANP32DO95626 131 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms