RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ATP5F1P24539 256 aaPredicted RBP12.91□□□□□ -0.34
PDAP1-202ENST00000426447 EDNRAP25101 427 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 PDLIM4P50479 330 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 RNF144AP50876 292 aaPredicted RBP12.91□□□□□ -0.34
PDAP1-202ENST00000426447 P2RX1P51575 399 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 POU6F2P78424 691 aaPredicted RBP12.91□□□□□ -0.34
PDAP1-202ENST00000426447 CARTPTQ16568 116 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 IQCCQ4KMZ1 466 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 ANKRD26P1Q6NSI1 321 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 CBLN3Q6UW01 205 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 C12orf54Q6X4T0 127 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 SLC22A9Q8IVM8 553 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF527Q8NB42 609 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 RFWD2Q8NHY2 731 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 CIDECQ96AQ7 238 aaPredicted RBP12.91□□□□□ -0.34
PDAP1-202ENST00000426447 C16orf58Q96GQ5 468 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 EGLN2Q96KS0 407 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 PIMREGQ9BSJ6 248 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 C1QTNF6Q9BXI9 259 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 ING1Q9UK53 422 aaPredicted RBP12.91□□□□□ -0.34
PDAP1-202ENST00000426447 ALPK2Q86TB3 2170 aa12.91□□□□□ -0.34
PDAP1-202ENST00000426447 ZNF724A8MTY0 619 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 TCF21O43680 179 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 CYTIPO60759 359 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 SEC22BO75396 215 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 CRCPO75575 148 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 SELENBP1Q13228 472 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 TOMM34Q15785 309 aaPredicted RBP12.9□□□□□ -0.34
PDAP1-202ENST00000426447 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.34
PDAP1-202ENST00000426447 FBXW9Q5XUX1 488 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 ZCCHC12Q6PEW1 402 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 B3GLCTQ6Y288 498 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 OR5B2Q96R09 309 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 BTBD2Q9BX70 525 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 HOXD1Q9GZZ0 328 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 KCNF1Q9H3M0 494 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 FKRPQ9H9S5 495 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
PDAP1-202ENST00000426447 TMEM216Q9P0N5 145 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 SH3BP4Q9P0V3 963 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 NTMQ9P121 344 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 SLC25A15Q9Y619 301 aa12.9□□□□□ -0.34
PDAP1-202ENST00000426447 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
PDAP1-202ENST00000426447 SPRY1O43609 319 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-202ENST00000426447 SNRPAP09012 282 aaKnown RBP12.89□□□□□ -0.35
PDAP1-202ENST00000426447 PRKCAP17252 672 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 APOBEC3AP31941 199 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-202ENST00000426447 NR4A2P43354 598 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 PRKAA2P54646 552 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 FOXA1P55317 472 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 SUMO3P55854 103 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-202ENST00000426447 SLC7A5Q01650 507 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 TMCO5AQ8N6Q1 288 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 CCNYL1Q8N7R7 359 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF614Q8N883 585 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 GPR119Q8TDV5 335 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF75CPQ92670 426 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-202ENST00000426447 PPCDCQ96CD2 204 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 GIMAP5Q96F15 307 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 TRMOQ9BU70 441 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 PLA2G12AQ9BZM1 189 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 EMC3Q9P0I2 261 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 FKBP7Q9Y680 259 aa12.89□□□□□ -0.35
PDAP1-202ENST00000426447 NPIPA5A0A0B4J1W7 369 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 NPIPA7E9PJI5 369 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 NDUFS8O00217 210 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 OIP5O43482 229 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 AKAP10O43572 662 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 RSL1D1O76021 490 aaKnown RBP12.88□□□□□ -0.35
PDAP1-202ENST00000426447 GSTA1P08263 222 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 NPIPA8P0DM63 369 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
PDAP1-202ENST00000426447 CCR4P51679 360 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 KLHL26Q53HC5 615 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 OR7E24Q6IFN5 339 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 TOR1AIP2Q8NFQ8 470 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 CDS1Q92903 461 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 APH1AQ96BI3 265 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 L3HYPDHQ96EM0 354 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 FOXN4Q96NZ1 517 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 SERINC1Q9NRX5 453 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 ZDHHC18Q9NUE0 388 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 ZNF180Q9UJW8 692 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 NOSIPQ9Y314 301 aaKnown RBP12.88□□□□□ -0.35
PDAP1-202ENST00000426447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.354e-7■■□□□ 13.3
PDAP1-202ENST00000426447 CADP27708 2225 aa12.88□□□□□ -0.35
PDAP1-202ENST00000426447 VWC2LB2RUY7 222 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms