RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CCR4P51679 360 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 SUMO3P55854 103 aaPredicted RBP11.41□□□□□ -0.58
SGCE-203ENST00000425444 UFM1P61960 85 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 HPCAP84074 193 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 KLHL26Q53HC5 615 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.587e-15■■□□□ 14.4
SGCE-203ENST00000425444 PDZK1Q5T2W1 519 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 TNFAIP8L2Q6P589 184 aaPredicted RBP11.41□□□□□ -0.58
SGCE-203ENST00000425444 VWA1Q6PCB0 445 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 TRIML2Q8N7C3 387 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 OR2V1Q8NHB1 315 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 LINC01560Q8TB33 94 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 TEX37Q96LM6 180 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 SDF2Q99470 211 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 NPAS1Q99742 590 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 SLC35A5Q9BS91 424 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 PAQR5Q9NXK6 330 aaPredicted RBP11.41□□□□□ -0.58
SGCE-203ENST00000425444 MCTS1Q9ULC4 181 aaKnown RBP11.41□□□□□ -0.58
SGCE-203ENST00000425444 DTNAQ9Y4J8 743 aa11.41□□□□□ -0.58
SGCE-203ENST00000425444 USF3Q68DE3 2245 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 TNFSF11O14788 317 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 OIP5O43482 229 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 CXCL13O43927 109 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 SCN2BO60939 215 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 STX11O75558 287 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 CYP7B1O75881 506 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 LINGO3P0C6S8 592 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 ELK4P28324 431 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 EIF1P41567 113 aaKnown RBP11.4□□□□□ -0.58
SGCE-203ENST00000425444 KCNJ5P48544 419 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 RAC1P63000 192 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 PHC1P78364 1004 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 OCRLQ01968 901 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 CBFBQ13951 182 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 FGFBP1Q14512 234 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 NDUFAF6Q330K2 333 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 ARHGAP11BQ3KRB8 267 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 PDSS1Q5T2R2 415 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 AGBL2Q5U5Z8 902 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 CBLN3Q6UW01 205 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 OR10D3Q8NH80 312 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 POC1BQ8TC44 478 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 PIWIL2Q8TC59 973 aaKnown RBP11.4□□□□□ -0.58
SGCE-203ENST00000425444 XAGE5Q8WWM1 108 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 RAB8BQ92930 207 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 MARK4Q96L34 752 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 PANX1Q96RD7 426 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 KLHDC3Q9BQ90 382 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 RNF122Q9H9V4 155 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 MKLN1Q9UL63 735 aa11.4□□□□□ -0.58
SGCE-203ENST00000425444 A0A1W2PPR1 153 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 SERINC4A6NH21 518 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 A8MXE2 369 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 MSTNO14793 375 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 ZNF264O43296 627 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 HRGP04196 525 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 PGRP06401 933 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 IDO1P14902 403 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 PSMA4P25789 261 aaKnown RBP11.39□□□□□ -0.59
SGCE-203ENST00000425444 SFTPDP35247 375 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 CTBP2P56545 445 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 SLC9B1Q4ZJI4 515 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 GPAT3Q53EU6 434 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 SAXO2Q658L1 398 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 HBMQ6B0K9 141 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 ESPNLQ6ZVH7 1005 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 OLIG3Q7RTU3 272 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 LILRA2Q8N149 483 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 GOLGA6L1Q8N7Z2 621 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 GLB1L3Q8NCI6 653 aaPredicted RBP11.39□□□□□ -0.59
SGCE-203ENST00000425444 FBXO27Q8NI29 283 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 MIPOL1Q8TD10 442 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 ZNF75CPQ92670 426 aaPredicted RBP11.39□□□□□ -0.59
SGCE-203ENST00000425444 PIGTQ969N2 578 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 STARD4Q96DR4 205 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 NEURL3Q96EH8 262 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 PERPQ96FX8 193 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 KLHL15Q96M94 604 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 OR52E6Q96RD3 313 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 ZNF350Q9GZX5 532 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 OPN3Q9H1Y3 402 aaPredicted RBP11.39□□□□□ -0.59
SGCE-203ENST00000425444 BTNL2Q9UIR0 455 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 ICAM5Q9UMF0 924 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 CLEC4AQ9UMR7 237 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 PROCRQ9UNN8 238 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 EMC9Q9Y3B6 208 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 WDR45Q9Y484 360 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 GPR45Q9Y5Y3 372 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 GPC6Q9Y625 555 aaPredicted RBP11.39□□□□□ -0.59
SGCE-203ENST00000425444 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
SGCE-203ENST00000425444 SH3D21A4FU49 640 aa11.38□□□□□ -0.59
SGCE-203ENST00000425444 CCDC154A6NI56 674 aa11.38□□□□□ -0.59
SGCE-203ENST00000425444 GJE1A6NN92 205 aa11.38□□□□□ -0.59
SGCE-203ENST00000425444 NPIPB9F8W1W9 429 aa11.38□□□□□ -0.59
SGCE-203ENST00000425444 KLF11O14901 512 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms