RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TSPY2A6NKD2 308 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SMIM23A6NLE4 172 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MIF4GDA9UHW6 222 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8NF8WBI6 632 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8RI6L899 631 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 hCG_2039718K7EN88 272 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 M0R296 226 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 BET1O15155 118 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 DKC1O60832 514 aaKnown RBP eCLIP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 KRT75O95678 551 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 HLA-DRAP01903 254 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 RPN1P04843 607 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GYPCP04921 128 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 TSPY3P0CV98 308 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 TSPY8P0CW00 308 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ATF6P18850 670 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 IL10P22301 178 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ACP1P24666 158 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 NUDT1P36639 197 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ALDH3B2P48448 385 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 IFNAR2P48551 515 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 HCAR3P49019 387 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SLC26A2P50443 739 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 VCPP55072 806 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MAP3K7CLP57077 242 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SRP54P61011 504 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GALK2Q01415 458 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 TSPY1Q01534 308 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 FOLH1Q04609 750 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 KDSRQ06136 332 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GFPT1Q06210 699 aaPredicted RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CDC20Q12834 499 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ORC2Q13416 577 aaPredicted RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 POU6F1Q14863 301 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 PSMD6Q15008 389 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 TRADDQ15628 312 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MPPED2Q15777 294 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 PKN2Q16513 984 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 RGS21Q2M5E4 152 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SMU1Q2TAY7 513 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 UNC50Q53HI1 259 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ACER2Q5QJU3 275 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 HYIQ5T013 277 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GPR157Q5UAW9 335 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SLX4IPQ5VYV7 408 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 DUPD1Q68J44 220 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 RWDD4Q6NW29 188 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 C8orf74Q6P047 294 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 PLBD1Q6P4A8 553 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 FAM47EQ6ZV65 393 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 NKAIN4Q8IVV8 208 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CDH26Q8IXH8 852 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 LINC00518Q8N0U6 118 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 BBOF1Q8ND07 529 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF540Q8NDQ6 660 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ACTRT1Q8TDG2 376 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 BORCS5Q969J3 196 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MARC2Q969Z3 335 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SGK3Q96BR1 496 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 PLEKHA8Q96JA3 519 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CEP170P1Q96L14 293 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CEP19Q96LK0 163 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 OPALINQ96PE5 141 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SLC29A1Q99808 456 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CCDC77Q9BR77 488 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 C19orf24Q9BVV8 132 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MRPS26Q9BYN8 205 aaKnown RBP2.6□□□□□ -1.99
LINC01040-201ENST00000425048 NEUROG2Q9H2A3 272 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 PALMDQ9NP74 551 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 AIPL1Q9NZN9 384 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GNPTGQ9UJJ9 305 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 ANAPC5Q9UJX4 755 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CDH7Q9ULB5 785 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 GUCA1BQ9UMX6 200 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 TRAF3IP3Q9Y228 551 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 CACNG2Q9Y698 323 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MAD1L1Q9Y6D9 718 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 SCN4AP35499 1836 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MROH7-TTC4A0A0A0MT08 1334 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 PFASO15067 1338 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 MAP3K15Q6ZN16 1313 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 TSPOAP1O95153 1857 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 DEPDC5O75140 1603 aa2.6□□□□□ -1.99
LINC01040-201ENST00000425048 FMN2Q9NZ56 1722 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 SIPA1L1O43166 1804 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ABCC1P33527 1531 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ABCA8O94911 1581 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 A0A1W2PRQ8 180 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ARHGEF35A5YM69 484 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 OR6C65A6NJZ3 312 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ATP6V1G2-DDX39BF2Z307 99 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 H3BSA7 217 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 PSMD11O00231 422 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 CCRL2O00421 344 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 TRDMT1O14717 391 aaKnown RBP2.59□□□□□ -1.99
LINC01040-201ENST00000425048 NDC80O14777 642 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 ACOX3O15254 700 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 SULT1B1O43704 296 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 JAK2O60674 1132 aa2.59□□□□□ -1.99
LINC01040-201ENST00000425048 YEATS4O95619 227 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms