RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 CACYBPQ9HB71 228 aaKnown RBP16.82■□□□□ 0.28
PRNP-202ENST00000424424 NPDC1Q9NQX5 325 aaPredicted RBP16.82■□□□□ 0.28
PRNP-202ENST00000424424 FGFR1OP2Q9NVK5 253 aa16.82■□□□□ 0.28
PRNP-202ENST00000424424 FOXD3Q9UJU5 478 aaPredicted RBP16.82■□□□□ 0.28
PRNP-202ENST00000424424 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 AGAP5A6NIR3 686 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 BCHEP06276 602 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 CRHP06850 196 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 DBIP07108 87 aaKnown RBP16.81■□□□□ 0.28
PRNP-202ENST00000424424 FCGR2AP12318 317 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 CAPN3P20807 821 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 PEX19P40855 299 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 AGFG1P52594 562 aaKnown RBP16.81■□□□□ 0.28
PRNP-202ENST00000424424 ARFIP2P53365 341 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 PON3Q15166 354 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 RGNQ15493 299 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 TOMM34Q15785 309 aaPredicted RBP16.81■□□□□ 0.28
PRNP-202ENST00000424424 PPP4R4Q6NUP7 873 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 POMZP3Q6PJE2 187 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 PLXDC2Q6UX71 529 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 GDF7Q7Z4P5 450 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 GCNT2Q8N0V5 402 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 ZNF563Q8TA94 476 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 ST8SIA1Q92185 356 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
PRNP-202ENST00000424424 TMEM185BQ9H7F4 350 aa16.81■□□□□ 0.28
PRNP-202ENST00000424424 LEF1Q9UJU2 399 aaPredicted RBP16.81■□□□□ 0.28
PRNP-202ENST00000424424 MCTS1Q9ULC4 181 aaKnown RBP16.81■□□□□ 0.28
PRNP-202ENST00000424424 EVPLLA8MZ36 301 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 EEF1E1-BLOC1S5C9J1V9 151 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SYT5O00445 386 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 ADAMDEC1O15204 470 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 EEF1E1O43324 174 aaKnown RBP16.8■□□□□ 0.28
PRNP-202ENST00000424424 SYNGR4O95473 234 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 OPN1LWP04000 364 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 TFPTP0C1Z6 253 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 IGFBP2P18065 325 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 UQCRC1P31930 480 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SFTPDP35247 375 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SLC6A8P48029 635 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 FOXF2Q12947 444 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SELENBP1Q13228 472 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SLC25A53Q5H9E4 307 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 PAGE3Q5JUK9 113 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 HBMQ6B0K9 141 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 HMGN2P46Q86SG4 172 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 DMRTC2Q8IXT2 367 aaPredicted RBP16.8■□□□□ 0.28
PRNP-202ENST00000424424 ACBD4Q8NC06 268 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 FAM71CQ8NEG0 241 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 OR10D3Q8NH80 312 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 OR2V1Q8NHB1 315 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 TSPEARQ8WU66 669 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SLC38A5Q8WUX1 472 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 FIG4Q92562 907 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 ZNF845Q96IR2 970 aaPredicted RBP16.8■□□□□ 0.28
PRNP-202ENST00000424424 KLHL15Q96M94 604 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 PIGMQ9H3S5 423 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 ZNF385DQ9H6B1 395 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 CCDC134Q9H6E4 229 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 SLC52A3Q9NQ40 469 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 TIGARQ9NQ88 270 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 EXOSC3Q9NQT5 275 aaKnown RBP16.8■□□□□ 0.28
PRNP-202ENST00000424424 SERINC1Q9NRX5 453 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 CORO2BQ9UQ03 480 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 NDUFAF1Q9Y375 327 aa16.8■□□□□ 0.28
PRNP-202ENST00000424424 A0A0G2JPF8 293 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 HNRNPCL2B2RXH8 293 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 HNRNPCL3B7ZW38 293 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 TNFSF11O14788 317 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 ANGPT2O15123 496 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 HNRNPCL1O60812 293 aaKnown RBP16.79■□□□□ 0.28
PRNP-202ENST00000424424 DNAJA2O60884 412 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 HNRNPCL4P0DMR1 293 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 HOXB9P17482 250 aaPredicted RBP16.79■□□□□ 0.28
PRNP-202ENST00000424424 MDH1P40925 334 aaKnown RBP16.79■□□□□ 0.28
PRNP-202ENST00000424424 CARD18P57730 90 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 FBXL19-AS1Q494R0 122 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 FNDC9Q8TBE3 224 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 RNASE6Q93091 150 aaKnown RBP16.79■□□□□ 0.28
PRNP-202ENST00000424424 TREX2Q9BQ50 279 aaPredicted RBP16.79■□□□□ 0.28
PRNP-202ENST00000424424 SLC25A37Q9NYZ2 338 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 SLAMF8Q9P0V8 285 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.79■□□□□ 0.28
PRNP-202ENST00000424424 ZNF232Q9UNY5 417 aa16.79■□□□□ 0.28
PRNP-202ENST00000424424 A0A0J9YW62 118 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 A0A1W2PNV4 684 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 C5orf58C9J3I9 102 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 ETV2O00321 342 aaPredicted RBP16.78■□□□□ 0.28
PRNP-202ENST00000424424 CXCL13O43927 109 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 NTN1O95631 604 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 NID1P14543 1247 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 UQCRBP14927 111 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 IL11P20809 199 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 RPS4Y1P22090 263 aaKnown RBP16.78■□□□□ 0.28
PRNP-202ENST00000424424 RYKP34925 604 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 SESN3P58005 492 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 LARS2Q15031 903 aaKnown RBP16.78■□□□□ 0.28
PRNP-202ENST00000424424 ZSWIM7Q19AV6 140 aa16.78■□□□□ 0.28
PRNP-202ENST00000424424 CTU2Q2VPK5 515 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms