RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ATAD3BQ5T9A4 648 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 ZNF474Q6S9Z5 364 aaPredicted RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 ESPNLQ6ZVH7 1005 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 LSRQ86X29 649 aaPredicted RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 ZNF619Q8N2I2 560 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 CNEP1R1Q8N9A8 125 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 TOR1AIP2Q8NFQ8 470 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 FAM222BQ8WU58 562 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 NRGNQ92686 78 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 VPS33AQ96AX1 596 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 KLHL15Q96M94 604 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 GPATCH1Q9BRR8 931 aaKnown RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 THUMPD3Q9BV44 507 aaKnown RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 OPN3Q9H1Y3 402 aaPredicted RBP15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 SLC38A1Q9H2H9 487 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 COQ10BQ9H8M1 238 aa15.98■□□□□ 0.15
SBDSP1-202ENST00000423945 ABCA4P78363 2273 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TUBAL3A6NHL2 446 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 CLDN24A6NM45 220 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 RFXANKO14593 260 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 ADAM11O75078 769 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TGDSO95455 350 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 CSTAP01040 98 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 ZCCHC18P0CG32 403 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 HOXB9P17482 250 aaPredicted RBP15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 SFTPDP35247 375 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 POLR2JP52435 117 aaKnown RBP15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 EEF1A1P68104 462 aaKnown RBP15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 DAZAP2Q15038 168 aaPredicted RBP15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TIGD2Q4W5G0 525 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 GPAT3Q53EU6 434 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 EEF1A1P5Q5VTE0 462 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 HBMQ6B0K9 141 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 CDH24Q86UP0 819 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TMEM200AQ86VY9 491 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 KIF18BQ86Y91 864 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 FUNDC1Q8IVP5 155 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 MIER2Q8N344 545 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TMCO5AQ8N6Q1 288 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TRIML2Q8N7C3 387 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 CKAP2Q8WWK9 683 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 MRGPRX4Q96LA9 322 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 SRXN1Q9BYN0 137 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 TCF7L2Q9NQB0 619 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 STOML1Q9UBI4 398 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 CLEC4AQ9UMR7 237 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 CELSR1Q9NYQ6 3014 aa15.97■□□□□ 0.15
SBDSP1-202ENST00000423945 FAM234BA2RU67 622 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 A6NNC1 897 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 CYP7B1O75881 506 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 SMNDC1O75940 238 aaKnown RBP eCLIP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 UBTFL6P0CB48 400 aaPredicted RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 EPXP11678 715 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 FCGR2AP12318 317 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 CD1EP15812 388 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 CPA2P48052 419 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 CCR4P51679 360 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 FAM27E3Q08E93 113 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 MSANTD1Q6ZTZ1 278 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 EIF3MQ7L2H7 374 aaKnown RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 OIT3Q8WWZ8 545 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 GTF2H4Q92759 462 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 OSTF1Q92882 214 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 AURKBQ96GD4 344 aaPredicted RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 TRNT1Q96Q11 434 aaKnown RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 SLC52A3Q9NQ40 469 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 RASSF1Q9NS23 344 aa15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 INTS9Q9NV88 658 aaKnown RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 ARGLU1Q9NWB6 273 aaPredicted RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 PAQR5Q9NXK6 330 aaPredicted RBP15.96■□□□□ 0.15
SBDSP1-202ENST00000423945 SS18L1O75177 396 aaPredicted RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 CD8BP10966 210 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 RPS4Y1P22090 263 aaKnown RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 ME2P23368 584 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 CCKARP32238 428 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 AQP5P55064 265 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 SESN3P58005 492 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 CBFBQ13951 182 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 ZNF239Q16600 458 aaKnown RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 TMEM176BQ3YBM2 270 aaPredicted RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 PPP4R4Q6NUP7 873 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 LRRC74BQ6ZQY2 392 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 FAM214BQ7L5A3 538 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 ZNF610Q8N9Z0 462 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 DYDC1Q8WWB3 177 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 ROBO4Q8WZ75 1007 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 CCDC28BQ9BUN5 200 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 PAIP1Q9H074 479 aaKnown RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 DNAJB12Q9NXW2 375 aaKnown RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 MCTS1Q9ULC4 181 aaKnown RBP15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 LIPT1Q9Y234 373 aa15.95■□□□□ 0.14
SBDSP1-202ENST00000423945 AGAP5A6NIR3 686 aa15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 POLR3GO15318 223 aaPredicted RBP15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 KRT75O95678 551 aa15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 ETFAP13804 333 aa15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 CPOXP36551 454 aa15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 CARD18P57730 90 aa15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 KCNJ10P78508 379 aa15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 TXNL4AP83876 142 aaKnown RBP15.94■□□□□ 0.14
SBDSP1-202ENST00000423945 SELENBP1Q13228 472 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms