RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 IQCGQ9H095 443 aaKnown RBP14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 POLR3HQ9Y535 204 aaPredicted RBP14.7□□□□□ -0.06
CHCHD3-202ENST00000423635 A0A1W2PNR3 127 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 ETV2O00321 342 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 RAD51DO75771 328 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 INHBAP08476 426 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 TAC1P20366 129 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 SLC7A1P30825 629 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 GPC1P35052 558 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 LCP2Q13094 533 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 SELENBP1Q13228 472 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 TOMM34Q15785 309 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 SWI5Q1ZZU3 235 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 CR1LQ2VPA4 569 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 KLHL26Q53HC5 615 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 TEX35Q5T0J7 233 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 PHOSPHO1Q8TCT1 267 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF524Q96C55 264 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF764Q96H86 408 aaPredicted RBP14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 EGLN2Q96KS0 407 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 KCNA7Q96RP8 456 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 PIMREGQ9BSJ6 248 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 ADAM19Q9H013 955 aa14.69□□□□□ -0.06
CHCHD3-202ENST00000423635 IGHV4-61A0A0C4DH41 118 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 OIP5O43482 229 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 KIAA0513O60268 411 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 NUDT14O95848 222 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 ALOX5P09917 674 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 FRKP42685 505 aaPredicted RBP14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 CHRNEQ04844 493 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 PDK3Q15120 406 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 CCNJQ5T5M9 372 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 NOXRED1Q6NXP6 359 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 TRIM46Q7Z4K8 759 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 C16orf58Q96GQ5 468 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 FOXN4Q96NZ1 517 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 MS4A4EQ96PG1 132 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 NINJ2Q9NZG7 142 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 CARD8Q9Y2G2 431 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 ATP23Q9Y6H3 246 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 TENM1Q9UKZ4 2725 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 ARFGEF3Q5TH69 2177 aa14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 HEATR1Q9H583 2144 aaKnown RBP14.68□□□□□ -0.06
CHCHD3-202ENST00000423635 IGKV3D-15A0A087WSY6 115 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 LOC390937A0A1W2PQ73 354 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 CIB4A0PJX0 185 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 M0R1B8 84 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 PDPK1O15530 556 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 TBX19O60806 448 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF23P17027 643 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 ITGA2P17301 1181 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 PRKAA2P54646 552 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 FOXA1P55317 472 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 POU6F2P78424 691 aaPredicted RBP14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 C2orf54Q08AI8 447 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 KIAA0040Q15053 153 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 GABRA6Q16445 453 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 OR7E24Q6IFN5 339 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 LRIG3Q6UXM1 1119 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 RELL1Q8IUW5 271 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 COX18Q8N8Q8 333 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 ZFP28Q8NHY6 868 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 FBXO30Q8TB52 745 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 CIDECQ96AQ7 238 aaPredicted RBP14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 L3HYPDHQ96EM0 354 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 METTL2AQ96IZ6 378 aaKnown RBP14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 BTBD2Q9BX70 525 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 HOXD1Q9GZZ0 328 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 FKRPQ9H9S5 495 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 MYOZ1Q9NP98 299 aaPredicted RBP14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 ZDHHC18Q9NUE0 388 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 GIN1Q9NXP7 522 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 TMEM216Q9P0N5 145 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF180Q9UJW8 692 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 FKBP7Q9Y680 259 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 MEGF8Q7Z7M0 2845 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 DYSFO75923 2080 aa14.67□□□□□ -0.06
CHCHD3-202ENST00000423635 A0A1W2PR80 420 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ESYT3A0FGR9 886 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 TRIM49D1C9J1S8 452 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 NPIPB8E9PQR5 432 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 RSL1D1O76021 490 aaKnown RBP14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ATP5F1P24539 256 aaPredicted RBP14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 PHC1P78364 1004 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 IMPG1Q17R60 797 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 WDR31Q8NA23 367 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF527Q8NB42 609 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ZNF540Q8NDQ6 660 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 STACQ99469 402 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 PAFAH2Q99487 392 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 SOX7Q9BT81 388 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 C12orf65Q9H3J6 166 aaKnown RBP14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 DUSP22Q9NRW4 184 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ACSS1Q9NUB1 689 aaPredicted RBP14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ASB6Q9NWX5 421 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 TAS2R16Q9NYV7 291 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 CCT8L1PA6NM43 557 aa14.66□□□□□ -0.06
CHCHD3-202ENST00000423635 ESPNB1AK53 854 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms