RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 DEPDC7Q96QD5 511 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 SYNDIG1Q9H7V2 258 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 RPS6KB2Q9UBS0 482 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 ERVK-19Q9WJR5 959 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 A0A0G2JMP0 313 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 A0A0X1KG70 313 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 DYRK3O43781 588 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 HPGDP15428 266 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 CLDN12P56749 244 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 RAB40BQ12829 278 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 PLET1Q6UQ28 207 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 SLC22A18ASQ8N1D0 253 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 OR4M2Q8NGB6 313 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 PHF21AQ96BD5 680 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 OR8D2Q9GZM6 311 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 TMEM27Q9HBJ8 222 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 PTTG1O95997 202 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 HOXD12P35452 270 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 TRA2BP62995 288 aaKnown RBP12.36□□□□□ -0.43
MCF2L-213ENST00000421756 POU6F2P78424 691 aaPredicted RBP12.36□□□□□ -0.43
MCF2L-213ENST00000421756 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 PLK5Q496M5 336 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 OR5M10Q6IEU7 315 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 MBOAT2Q6ZWT7 520 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 SSX6Q7RTT6 188 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 ACBD7Q8N6N7 88 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 THAP3Q8WTV1 239 aaPredicted RBP12.36□□□□□ -0.43
MCF2L-213ENST00000421756 RFKQ969G6 155 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 PMEPA1Q969W9 287 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 ELF4Q99607 663 aaPredicted RBP12.36□□□□□ -0.43
MCF2L-213ENST00000421756 PDCD1LG2Q9BQ51 273 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 CLEC1BQ9P126 229 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 MED31Q9Y3C7 131 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 N6AMT1Q9Y5N5 214 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 HEBP2Q9Y5Z4 205 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 URADA6NGE7 173 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 E9PQ18 207 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 OR5F1O95221 314 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 GABRG2P18507 467 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 AKT2P31751 481 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF136P52737 540 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SMAD2Q15796 467 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 AGAP6Q5VW22 663 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 PRR23CQ6ZRP0 262 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 VWA5B2Q8N398 1253 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 CLDN22Q8N7P3 220 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 OR4C3Q8NH37 302 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SLC22A18Q96BI1 424 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 AGAP4Q96P64 663 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 FUZQ9BT04 418 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 ANKHQ9HCJ1 492 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 LYARQ9NX58 379 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 CALML5Q9NZT1 146 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 IER3IP1Q9Y5U9 82 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 ISPDA4D126 451 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 OR6C70A6NIJ9 312 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 AKAP8O43823 692 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 PTHLHP12272 177 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 ERVK-25P63136 954 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 NDUFA9Q16795 377 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 BEST4Q8NFU0 473 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 HS6ST2Q96MM7 605 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SERINC2Q96SA4 455 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 ORAI3Q9BRQ5 295 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 NT5DC2Q9H857 520 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SP140LQ9H930 580 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 MEPEQ9NQ76 525 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 PHF11Q9UIL8 331 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 ING1Q9UK53 422 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SLC22A7Q9Y694 548 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 LTBP2Q14767 1821 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 GPR75O95800 540 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 F13BP05160 661 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SYPP08247 313 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 CPEP16870 476 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 GFERP55789 205 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 FOXK2Q01167 660 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 LMX1AQ8TE12 382 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 RIT1Q92963 219 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 NMNAT3Q96T66 252 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 MCOLN1Q9GZU1 580 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 SRA1Q9HD15 236 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 DHCR7Q9UBM7 475 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 GNG8Q9UK08 70 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 RASD1Q9Y272 281 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 AK6Q9Y3D8 172 aaKnown RBP12.35□□□□□ -0.43
MCF2L-213ENST00000421756 CDH10Q9Y6N8 788 aa12.35□□□□□ -0.43
MCF2L-213ENST00000421756 FAM86C2PA6NEL3 165 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 CENPXA8MT69 81 aa12.34□□□□□ -0.43
MCF2L-213ENST00000421756 CPNE3O75131 537 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms