RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR8D4Q8NGM9 314 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 PFN4Q8NHR9 129 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 GRHL3Q8TE85 626 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 TMEM239Q8WW34 195 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 TP53INP1Q96A56 240 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 EGLN3Q9H6Z9 239 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 C20orf141Q9NUB4 165 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 EP300Q09472 2414 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 A0A1W2PNU3 283 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 ZNF99A8MXY4 864 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 TMX2-CTNND1H3BSU7 103 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 ZNF354AO60765 605 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 GPR4P46093 362 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 GIPRP48546 466 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 CDC42P60953 191 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 EMX1Q04741 257 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 SKP2Q13309 424 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 CBLN3Q6UW01 205 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 KIRREL2Q6UWL6 708 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 DHRS13Q6UX07 377 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 GLRX5Q86SX6 157 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 IQCF1Q8N6M8 205 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 ZNF527Q8NB42 609 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 ZNF540Q8NDQ6 660 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 DEFB124Q8NES8 71 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 RAB2BQ8WUD1 216 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 IPCEF1Q8WWN9 437 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 SIGLEC11Q96RL6 698 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 LPAR4Q99677 370 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 MEPEQ9NQ76 525 aaPredicted RBP19.23■□□□□ 0.67
GPC1-202ENST00000420138 PLCXD1Q9NUJ7 323 aa19.23■□□□□ 0.67
GPC1-202ENST00000420138 LOC102723996A0A087X1L8 192 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 SCDO00767 359 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 CSO75390 466 aaKnown RBP19.22■□□□□ 0.67
GPC1-202ENST00000420138 PNLIPRP2P54317 469 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 SLC26A5P58743 744 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 NCF4Q15080 339 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 DCAF12Q5T6F0 453 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 RAB11FIP2Q7L804 512 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 NUBPLQ8TB37 319 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 VMP1Q96GC9 406 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 KLHDC3Q9BQ90 382 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 IMPAD1Q9NX62 359 aa19.22■□□□□ 0.67
GPC1-202ENST00000420138 PROB1E7EW31 1015 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 ADAM10O14672 748 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 RGS10O43665 173 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 NGFRP08138 427 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 MAKP20794 623 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 IL12BP29460 328 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 STAT5AP42229 794 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 EFNB1P98172 346 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 PRKCDQ05655 676 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 ACSM5Q6NUN0 579 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 SVOPQ8N4V2 548 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 FAR1Q8WVX9 515 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 FGF11Q92914 225 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 ZNF524Q96C55 264 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 DCUN1D5Q9BTE7 237 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 EXOSC3Q9NQT5 275 aaKnown RBP19.21■□□□□ 0.67
GPC1-202ENST00000420138 GPN3Q9UHW5 284 aaPredicted RBP19.21■□□□□ 0.67
GPC1-202ENST00000420138 INMTO95050 263 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 UBL4AP11441 157 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 HPGDP15428 266 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 CCNA2P20248 432 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 RAB15P59190 212 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 GINS1Q14691 196 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 ALG10BQ5I7T1 473 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 MRGPREQ86SM8 312 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 P3H2Q8IVL5 708 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 ZNF440Q8IYI8 595 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 PHOSPHO1Q8TCT1 267 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 LIN37Q96GY3 246 aaPredicted RBP19.21■□□□□ 0.67
GPC1-202ENST00000420138 SH3GL3Q99963 347 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 SPRY4Q9C004 299 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 SLC25A19Q9HC21 320 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 ATP13A2Q9NQ11 1180 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 FKBP14Q9NWM8 211 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 IL20Q9NYY1 176 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 C19orf25Q9UFG5 118 aaPredicted RBP19.21■□□□□ 0.67
GPC1-202ENST00000420138 WARS2Q9UGM6 360 aaKnown RBP19.21■□□□□ 0.67
GPC1-202ENST00000420138 CARD8Q9Y2G2 431 aa19.21■□□□□ 0.67
GPC1-202ENST00000420138 TRBV11-1A0A0K0K1C0 115 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 ALG1L2C9J202 215 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 STK17BO94768 372 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 MT-CO3P00414 261 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 SNRPGP62308 76 aaKnown RBP19.2■□□□□ 0.66
GPC1-202ENST00000420138 PCOLCEQ15113 449 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 ULK3Q6PHR2 472 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 ZNF620Q6ZNG0 422 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 PTCHD4Q6ZW05 846 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 PRSS48Q7RTY5 328 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 OR8K3Q8NH51 312 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 WDR36Q8NI36 951 aaKnown RBP19.2■□□□□ 0.66
GPC1-202ENST00000420138 RNF217Q8TC41 542 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 RORBQ92753 470 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 DEPDC7Q96QD5 511 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 GPN2Q9H9Y4 310 aaPredicted RBP19.2■□□□□ 0.66
GPC1-202ENST00000420138 PSORS1C1Q9UIG5 152 aa19.2■□□□□ 0.66
GPC1-202ENST00000420138 A0A1W2PPW3 197 aa19.19■□□□□ 0.66
GPC1-202ENST00000420138 A0A1W2PQD3 144 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms