RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 KHDRBS3O75525 346 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC2A10O95528 541 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MT-ND5P03915 603 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ZDHHC11BP0C7U3 371 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ACADLP28330 430 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 CTGFP29279 349 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MAT2AP31153 395 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 OMPP47874 163 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MRPS6P82932 125 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 GUCA2BQ16661 112 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 C2orf68Q2NKX9 166 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 AVPI1Q5T686 147 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 HEPHL1Q6MZM0 1159 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 SPAG16Q8N0X2 631 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM185AQ8NFB2 350 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 OR52B4Q8NGK2 314 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 LGALS14Q8TCE9 139 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ELP5Q8TE02 316 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 SMAP2Q8WU79 429 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 OR5P2Q8WZ92 322 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MS4A4EQ96PG1 132 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 TBX5Q99593 518 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 TINF2Q9BSI4 451 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 CWH43Q9H720 699 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC22A11Q9NSA0 550 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 NUP210Q8TEM1 1887 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 DAPL1A0PJW8 107 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 UBE2QL1A1L167 161 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 NPIPB15A6NHN6 443 aaPredicted RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF197O14709 1029 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 KRT33AO76009 404 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 PCDH8O95206 1070 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 CRYBA1P05813 215 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF806P0C7X5 589 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ART1P52961 327 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 TAS2R43P59537 309 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 CSRP2Q16527 193 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 ARSIQ5FYB1 569 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 C18orf63Q68DL7 685 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 GID4Q8IVV7 300 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 BRIX1Q8TDN6 353 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 SETD7Q8WTS6 366 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MRPL48Q96GC5 212 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 NDC1Q9BTX1 674 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 CRB3Q9BUF7 120 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MFRPQ9BY79 579 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 CACYBPQ9HB71 228 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 P2RX2Q9UBL9 471 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 KLK11Q9UBX7 282 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 RANBP2P49792 3224 aaKnown RBP7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 MYO10Q9HD67 2058 aa7.46□□□□□ -1.22
HMGXB4-202ENST00000418170 OR6C74A6NCV1 312 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 FAM183AA6NL82 134 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 M0QZ92 97 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 FLRT2O43155 660 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 RAD1O60671 282 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 NDUFS6O75380 124 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC16A8O95907 504 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 S100A9P06702 114 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ATP1B2P14415 290 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 IMPA1P29218 277 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 NOS3P29474 1203 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 FNTBP49356 437 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 CCSMST1Q4G0I0 132 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 PAN3Q58A45 887 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 MANEAQ5SRI9 462 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ADCK2Q7Z695 626 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC25A28Q96A46 364 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 NEUROD4Q9HD90 331 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ZMIZ1Q9ULJ6 1067 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 IRAK3Q9Y616 596 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 RAB19A4D1S5 217 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 K7ERQ8 282 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 KLKB1P03952 638 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 VSIG10L2P0DP72 767 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ALPPL2P10696 532 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ADCYAP1P18509 176 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 LAG3P18627 525 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 STARP49675 285 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 MANFP55145 182 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 MPPED2Q15777 294 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 DCAF12L2Q5VW00 463 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 FAAP20Q6NZ36 180 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC36A1Q7Z2H8 476 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SYT9Q86SS6 491 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 DNAAF1Q8NEP3 725 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2AK2Q8NG84 335 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 OR5D16Q8NGK9 328 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF671Q8TAW3 534 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ASZ1Q8WWH4 475 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 FCAMRQ8WWV6 532 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM169Q96HH4 297 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 OR51M1Q9H341 326 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 SIRT3Q9NTG7 399 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ZFP57Q9NU63 452 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ABHD14A-ACY1A0A1B0GW23 586 aa7.45□□□□□ -1.22
HMGXB4-202ENST00000418170 ANKRD61A6NGH8 418 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms