RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 SFTPDP35247 375 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 SLC6A8P48029 635 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 CTBP2P56545 445 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 CARD18P57730 90 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 QPRTQ15274 297 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 TOMM34Q15785 309 aaPredicted RBP13.74□□□□□ -0.21
NUP50-204ENST00000417702 GPAT3Q53EU6 434 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 GTF2IRD2BQ6EKJ0 949 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 TYW3Q6IPR3 259 aaKnown RBP13.74□□□□□ -0.21
NUP50-204ENST00000417702 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 OLIG3Q7RTU3 272 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 MAVSQ7Z434 540 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 GTF2IRD2Q86UP8 949 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 ZNF619Q8N2I2 560 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 ARFGAP2Q8N6H7 521 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
NUP50-204ENST00000417702 GMPPAQ96IJ6 420 aaPredicted RBP13.74□□□□□ -0.21
NUP50-204ENST00000417702 MARK4Q96L34 752 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 OR52B2Q96RD2 323 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 OPN3Q9H1Y3 402 aaPredicted RBP13.74□□□□□ -0.21
NUP50-204ENST00000417702 RMND5AQ9H871 391 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 MED4Q9NPJ6 270 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 SDR39U1Q9NRG7 319 aaPredicted RBP13.74□□□□□ -0.21
NUP50-204ENST00000417702 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 ELOVL5Q9NYP7 299 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 KCNE5Q9UJ90 142 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 EDARQ9UNE0 448 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 LIPT1Q9Y234 373 aa13.74□□□□□ -0.21
NUP50-204ENST00000417702 HEATR5AQ86XA9 2040 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 FAM221AA4D161 298 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 SH3D21A4FU49 640 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 HMGN4O00479 90 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 GOSR1O95249 250 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 ANP32DO95626 131 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 KRT75O95678 551 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 GSNP06396 782 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 PABPC4LP0CB38 370 aaKnown RBP13.73□□□□□ -0.21
NUP50-204ENST00000417702 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
NUP50-204ENST00000417702 CD8BP10966 210 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 CD79BP40259 229 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 CDKN2CP42773 168 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 KCNJ5P48544 419 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 PCYT1AP49585 367 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 SKP2Q13309 424 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 TMEM176BQ3YBM2 270 aaPredicted RBP13.73□□□□□ -0.21
NUP50-204ENST00000417702 MIER2Q8N344 545 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 ATP6V1C2Q8NEY4 427 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 MAGEB18Q96M61 343 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 THUMPD3Q9BV44 507 aaKnown RBP13.73□□□□□ -0.21
NUP50-204ENST00000417702 SAP130Q9H0E3 1048 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 SLC35A3Q9Y2D2 325 aa13.73□□□□□ -0.21
NUP50-204ENST00000417702 PDZD2O15018 2839 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 CENPVL1A0A0U1RR11 272 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 TGDSO95455 350 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 H6PDO95479 791 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 CGAP01215 116 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 POU2F1P14859 743 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 PGCP20142 388 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 SHC1P29353 583 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 SLC7A1P30825 629 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 MAGEA8P43361 318 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 POLR2JP52435 117 aaKnown RBP13.72□□□□□ -0.21
NUP50-204ENST00000417702 STX1BP61266 288 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 CHRNEQ04844 493 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 FAM27E3Q08E93 113 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 FUT5Q11128 374 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 MAPK14Q16539 360 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 SLC25A53Q5H9E4 307 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 ZNF474Q6S9Z5 364 aaPredicted RBP13.72□□□□□ -0.21
NUP50-204ENST00000417702 EPGNQ6UW88 154 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 FRRS1Q6ZNA5 592 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 MSANTD1Q6ZTZ1 278 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 OR6K3Q8NGY3 331 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 TMEM234Q8WY98 164 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
NUP50-204ENST00000417702 ITCHQ96J02 903 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 TRNT1Q96Q11 434 aaKnown RBP13.72□□□□□ -0.21
NUP50-204ENST00000417702 SERINC1Q9NRX5 453 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.72□□□□□ -0.21
NUP50-204ENST00000417702 CLEC4AQ9UMR7 237 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 TACC2O95359 2948 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 F8P00451 2351 aa13.72□□□□□ -0.21
NUP50-204ENST00000417702 C16orf97H3BN30 126 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 ETV2O00321 342 aaPredicted RBP13.71□□□□□ -0.21
NUP50-204ENST00000417702 POLR3GO15318 223 aaPredicted RBP13.71□□□□□ -0.21
NUP50-204ENST00000417702 EFNA2O43921 213 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 DNAJA2O60884 412 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 SS18L1O75177 396 aaPredicted RBP13.71□□□□□ -0.21
NUP50-204ENST00000417702 NTN1O95631 604 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 NR2F1P10589 423 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.21
NUP50-204ENST00000417702 PGM1P36871 562 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 SESN3P58005 492 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 KCNJ10P78508 379 aa13.71□□□□□ -0.21
NUP50-204ENST00000417702 TIGD2Q4W5G0 525 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms