RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PYURFQ96I23 114 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SFXN2Q96NB2 322 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 FRMD6Q96NE9 622 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 PIGQQ9BRB3 760 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 DEFB127Q9H1M4 99 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 TSPAN10Q9H1Z9 355 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF703Q9H7S9 590 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SLC24A3Q9HC58 644 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 CTPS2Q9NRF8 586 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SERINC1Q9NRX5 453 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 OLAHQ9NV23 265 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 QPCTLQ9NXS2 382 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 FBXL2Q9UKC9 423 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 NPIPA1Q9UND3 350 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 SPIN1Q9Y657 262 aaPredicted RBP7.7□□□□□ -1.18
TRIM48-201ENST00000417545 DMXL2Q8TDJ6 3036 aa7.7□□□□□ -1.18
TRIM48-201ENST00000417545 IGLV3-32A0A0A0MS00 114 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 DHRS12A0PJE2 317 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 PINLYPA6NC86 204 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 LRRC3CA6NJW4 275 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ELOA3DA6NLF2 546 aaPredicted RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 C17orf51A8MQB3 221 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ANKRD65E5RJM6 399 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 hCG_2039718K7EN88 272 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 OIP5O43482 229 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GCM2O75603 506 aaPredicted RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GPIP06744 558 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 UMPSP11172 480 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 HOXB6P17509 224 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 CXCR1P25024 350 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 EIF1P41567 113 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 HTR3AP46098 478 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 HOXC5Q00444 222 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 MS4A2Q01362 244 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 MERTKQ12866 999 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 NRF1Q16656 503 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 WIPI1Q5MNZ9 446 aaPredicted RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FNDC7Q5VTL7 733 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 WBP2NLQ6ICG8 309 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 AAGABQ6PD74 315 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ENPP6Q6UWR7 440 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 YRDCQ86U90 279 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ZDHHC21Q8IVQ6 265 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 LSM14AQ8ND56 463 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FAM83FQ8NEG4 500 aaPredicted RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ATP6V1C2Q8NEY4 427 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GPR32P1Q8NGA4 272 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ST8SIA1Q92185 356 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 NR4A3Q92570 626 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ARSGQ96EG1 525 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ARHGDIGQ99819 225 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FNDC11Q9BVV2 318 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 RTN4RQ9BZR6 473 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 SLC6A15Q9H2J7 730 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 PROK2Q9HC23 129 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 MED17Q9NVC6 651 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ICAM5Q9UMF0 924 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 MAP1BP46821 2468 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 TRGV5A0A0B4J1U4 118 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GJE1A6NN92 205 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 H3BML4 177 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ACOT8O14734 319 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 RFPL3SP0C7P2 107 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 TFPIP10646 304 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF17P17021 662 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 CCNA2P20248 432 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 POU3F2P20265 443 aaPredicted RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GTF2E2P29084 291 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 SLC7A1P30825 629 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 YAP1P46937 504 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 POLR2HP52434 150 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 SPIBQ01892 262 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 RBPJQ06330 500 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FOXF1Q12946 379 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 KPNB1Q14974 876 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 OR1Q1Q15612 314 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FXNQ16595 210 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 PLPPR5Q32ZL2 321 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ALG10BQ5I7T1 473 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ENTPD8Q5MY95 495 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 PDSS1Q5T2R2 415 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 AP1ARQ63HQ0 302 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 PPP4R4Q6NUP7 873 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 ARSKQ6UWY0 536 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 CHMP1BQ7LBR1 199 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 RRM2BQ7LG56 351 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 PRICKLE2Q7Z3G6 844 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GRINAQ7Z429 371 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GHDCQ8N2G8 530 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FADS6Q8N9I5 356 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 FAM71CQ8NEG0 241 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 OR6T1Q8NGN1 323 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 GPR119Q8TDV5 335 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 DNAJA4Q8WW22 397 aaPredicted RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 MRGPRX4Q96LA9 322 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 OR2B2Q9GZK3 357 aa7.69□□□□□ -1.18
TRIM48-201ENST00000417545 POLR2J2Q9GZM3 115 aaKnown RBP7.69□□□□□ -1.18
TRIM48-201ENST00000417545 POLR2J3Q9H1A7 115 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms