RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TMEM176BQ3YBM2 270 aaPredicted RBP22.62■■□□□ 1.21
VEGFA-208ENST00000417285 ANKRD46Q86W74 232 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 CLEC4FQ8N1N0 589 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 MGARPQ8TDB4 240 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 ARSGQ96EG1 525 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 HDHD5Q9BXW7 423 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 SERHL2Q9H4I8 314 aa22.62■■□□□ 1.21
VEGFA-208ENST00000417285 E9PBE3 544 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 SMPD2O60906 423 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 CPSF4O95639 269 aaKnown RBP22.61■■□□□ 1.21
VEGFA-208ENST00000417285 AGR2O95994 175 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 PRKCAP17252 672 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 RNF144AP50876 292 aaPredicted RBP22.61■■□□□ 1.21
VEGFA-208ENST00000417285 SLC18A1P54219 525 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 ZNF239Q16600 458 aaKnown RBP22.61■■□□□ 1.21
VEGFA-208ENST00000417285 ARHGAP11BQ3KRB8 267 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 SLC25A53Q5H9E4 307 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 BEX5Q5H9J7 111 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 SPANXN4Q5MJ08 99 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 TMEM201Q5SNT2 666 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 ATG16L1Q676U5 607 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 C20orf204Q6ZNR8 217 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 C22orf34Q6ZV56 151 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 C16orf62Q7Z3J2 963 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 SPATA19Q7Z5L4 167 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 MIPOL1Q8TD10 442 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 RNF128Q8TEB7 428 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 ROBO4Q8WZ75 1007 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 NKIRAS1Q9NYS0 192 aa22.61■■□□□ 1.21
VEGFA-208ENST00000417285 SERINC4A6NH21 518 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 TRPC5OSA6NMA1 111 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 SDHDO14521 159 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 PRKD3O94806 890 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 NTN1O95631 604 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 UBL4AP11441 157 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 NID1P14543 1247 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 AGTR1P30556 359 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 S100A3P33764 101 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 MAGOHP61326 146 aaKnown RBP22.6■■□□□ 1.21
VEGFA-208ENST00000417285 PHC1P78364 1004 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 CBFBQ13951 182 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 CASP8Q14790 479 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 GPR68Q15743 365 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 ZNF141Q15928 474 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 PDZK1Q5T2W1 519 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 ATAD3BQ5T9A4 648 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 BIVMQ86UB2 503 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 P3H2Q8IVL5 708 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 SLC43A2Q8N370 569 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 TMCO5AQ8N6Q1 288 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 RAB3IL1Q8TBN0 382 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 OIT3Q8WWZ8 545 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 TACO1Q9BSH4 297 aaKnown RBP22.6■■□□□ 1.21
VEGFA-208ENST00000417285 LAT2Q9GZY6 243 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 OR51I1Q9H343 314 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 UBTD1Q9HAC8 227 aa22.6■■□□□ 1.21
VEGFA-208ENST00000417285 NAV3Q8IVL0 2385 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 ETV2O00321 342 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-208ENST00000417285 HDAC3O15379 428 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 KLF4O43474 513 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 SNNO75324 88 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-208ENST00000417285 THBDP07204 575 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 GUSBP08236 651 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 ALDOCP09972 364 aaKnown RBP22.59■■□□□ 1.21
VEGFA-208ENST00000417285 PSMB1P20618 241 aaKnown RBP22.59■■□□□ 1.21
VEGFA-208ENST00000417285 NR1H2P55055 460 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 TOMM34Q15785 309 aaPredicted RBP22.59■■□□□ 1.21
VEGFA-208ENST00000417285 FAM174BQ3ZCQ3 159 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 AP1ARQ63HQ0 302 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 STEAP2Q8NFT2 490 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 C18orf12Q96KH6 178 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 ZNF350Q9GZX5 532 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 AIG1Q9NVV5 245 aa22.59■■□□□ 1.21
VEGFA-208ENST00000417285 ROS1P08922 2347 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 ARID1AO14497 2285 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 SLCO1B7G3V0H7 640 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 FCMRO60667 390 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 DNAJA2O60884 412 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 YES1P07947 543 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 OR12D1P0DN82 309 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 LOXP28300 417 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-208ENST00000417285 SHC1P29353 583 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 CHI3L1P36222 383 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-208ENST00000417285 NME5P56597 212 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 RAC3P60763 192 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 SELENBP1Q13228 472 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 NDUFAF6Q330K2 333 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 BEND6Q5SZJ8 279 aaPredicted RBP22.58■■□□□ 1.21
VEGFA-208ENST00000417285 SAXO2Q658L1 398 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 PRSS57Q6UWY2 283 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 FCRLAQ7L513 359 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 RFWD2Q8NHY2 731 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 ZFP90Q8TF47 636 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 NEURL3Q96EH8 262 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 CCL19Q99731 98 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 SRXN1Q9BYN0 137 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 C12orf49Q9H741 205 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 POLE3Q9NRF9 147 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 KLHL13Q9P2N7 655 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 MARCOQ9UEW3 520 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms