RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SLC25A53Q5H9E4 307 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 C6orf136Q5SQH8 315 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 SLC43A2Q8N370 569 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 ZNF614Q8N883 585 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 BANPQ8N9N5 519 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 RFWD2Q8NHY2 731 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 PIWIL2Q8TC59 973 aaKnown RBP13.15□□□□□ -0.3
RPS28-201ENST00000417088 AGR3Q8TD06 166 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 SMAP2Q8WU79 429 aaPredicted RBP13.15□□□□□ -0.3
RPS28-201ENST00000417088 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 COQ8BQ96D53 544 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 TRMT61AQ96FX7 289 aaKnown RBP13.15□□□□□ -0.3
RPS28-201ENST00000417088 MRGPRX4Q96LA9 322 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 C3orf30Q96M34 536 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 MECRQ9BV79 373 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 EML4Q9HC35 981 aaKnown RBP13.15□□□□□ -0.3
RPS28-201ENST00000417088 NGBQ9NPG2 151 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 DTNAQ9Y4J8 743 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 FBN3Q75N90 2809 aa13.15□□□□□ -0.3
RPS28-201ENST00000417088 ABCA1O95477 2261 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 A0A1W2PNR3 127 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 DPRXA6NFQ7 191 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 ESPNB1AK53 854 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 ETV2O00321 342 aaPredicted RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 EIF4E2O60573 245 aaKnown RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 CRLF1O75462 422 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 SLU7O95391 586 aaKnown RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 ARRB2P32121 409 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 RAC3P60763 192 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 SELENBP1Q13228 472 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 VEZF1Q14119 521 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 ZNF672Q499Z4 452 aaPredicted RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 ATP6AP1LQ52LC2 224 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 IL23RQ5VWK5 629 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 BHLHA15Q7RTS1 189 aaPredicted RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 RIMKLAQ8IXN7 391 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 KRTCAP2Q8N6L1 136 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 NATD1Q8N6N6 113 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 MAPK1IP1LQ8NDC0 245 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 OR5W2Q8NH69 310 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 SFXN5Q8TD22 340 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 OR7D2Q96RA2 312 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 SDF2Q99470 211 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 USB1Q9BQ65 265 aaKnown RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 PSD2Q9BQI7 771 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 C1orf50Q9BV19 199 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 BCO1Q9HAY6 547 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 ATAD3AQ9NVI7 634 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 PRSS50Q9UI38 385 aa13.14□□□□□ -0.31
RPS28-201ENST00000417088 MAGED1Q9Y5V3 778 aaPredicted RBP13.14□□□□□ -0.31
RPS28-201ENST00000417088 FBN1P35555 2871 aaKnown RBP13.13□□□□□ -0.31
RPS28-201ENST00000417088 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 ZNF264O43296 627 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
RPS28-201ENST00000417088 H6PDO95479 791 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 THBS1P07996 1170 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 UBL4AP11441 157 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 EDNRAP25101 427 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 SLC7A1P30825 629 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 IDUAP35475 653 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 CDKN1AP38936 164 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 OR3A2P47893 321 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 BSPH1Q075Z2 132 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 QPRTQ15274 297 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 ETFDHQ16134 617 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 PGGHGQ32M88 737 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 DNAJC14Q6Y2X3 702 aaPredicted RBP13.13□□□□□ -0.31
RPS28-201ENST00000417088 ZCCHC23Q6ZST2 131 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 Q6ZT83 130 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 TOR1AIP2Q8NFQ8 470 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 KBTBD8Q8NFY9 601 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 OR5D16Q8NGK9 328 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 OR5AK3PQ8NH89 298 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 GTPBP3Q969Y2 492 aaKnown RBP13.13□□□□□ -0.31
RPS28-201ENST00000417088 MOAP1Q96BY2 351 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 REG4Q9BYZ8 158 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 LIPT1Q9Y234 373 aa13.13□□□□□ -0.31
RPS28-201ENST00000417088 A0A1W2PP18 115 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 SERINC4A6NH21 518 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 C9JVG2 144 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 SMAD9O15198 467 aaKnown RBP13.12□□□□□ -0.31
RPS28-201ENST00000417088 CFLARO15519 480 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 CYTIPO60759 359 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 DNAJA2O60884 412 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 LYZL6O75951 148 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 ACVR1BP36896 505 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 CCR4P51679 360 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 HBA1P69905 142 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 RASGEF1BQ0VAM2 473 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 CBFBQ13951 182 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 PDZK1Q5T2W1 519 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
RPS28-201ENST00000417088 TMCO5AQ8N6Q1 288 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms