RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	LUZP2	Q86TE4	346 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	FUNDC1	Q8IVP5	155 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	ZZZ3	Q8IYH5	903 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	LILRA2	Q8N149	483 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	CNEP1R1	Q8N9A8	125 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	TOR1AIP2	Q8NFQ8	470 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	OR10D3	Q8NH80	312 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	OR2V1	Q8NHB1	315 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	GTF2H4	Q92759	462 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	C14orf79	Q96F83	325 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	LRRC46	Q96FV0	321 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	AURKB	Q96GD4	344 aa	Predicted RBP	7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	LURAP1	Q96LR2	239 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	TRNT1	Q96Q11	434 aa	Known RBP	7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	ZNF559	Q9BR84	538 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	THUMPD3	Q9BV44	507 aa	Known RBP	7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	LAT2	Q9GZY6	243 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	QRSL1	Q9H0R6	528 aa	Known RBP	7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	SLC38A1	Q9H2H9	487 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	ACBD3	Q9H3P7	528 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	RNF122	Q9H9V4	155 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	TPT1P8	Q9HAU6	139 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	KCNN3	Q9UGI6	736 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	PACSIN3	Q9UKS6	424 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	LIPT1	Q9Y234	373 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	GPC6	Q9Y625	555 aa	Predicted RBP	7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	CSMD2	Q7Z408	3487 aa		7.53	□□□□□ -1.2
CCT3-208	ENST00000415548	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	POLQ	O75417	2590 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CLDN24	A6NM45	220 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ADAMDEC1	O15204	470 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	EDF1	O60869	148 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	DNAJA2	O60884	412 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.52	□□□□□ -1.21	1e-7	■□□□□ 9.2
CCT3-208	ENST00000415548	SYNGR4	O95473	234 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CRH	P06850	196 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	NR2F1	P10589	423 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ETFA	P13804	333 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	HOXB9	P17482	250 aa	Predicted RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ELK4	P28324	431 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ADH6	P28332	368 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	RYK	P34925	604 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CRAT	P43155	626 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	KIR2DL2	P43627	348 aa	Predicted RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	KIR2DL3	P43628	341 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CPA2	P48052	419 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	DSTN	P60981	165 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	EEF1A1	P68104	462 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	KCNJ10	P78508	379 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	TXNL4A	P83876	142 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	PLAUR	Q03405	335 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SQLE	Q14534	574 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	MAPK11	Q15759	364 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	TMEM176B	Q3YBM2	270 aa	Predicted RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SLC25A53	Q5H9E4	307 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	EEF1A1P5	Q5VTE0	462 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	HBM	Q6B0K9	141 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	BLOC1S3	Q6QNY0	202 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	LRRC74B	Q6ZQY2	392 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ESPNL	Q6ZVH7	1005 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	BTLA	Q7Z6A9	289 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	FAM71C	Q8NEG0	241 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ATP6V1C2	Q8NEY4	427 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	OIT3	Q8WWZ8	545 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CNOT9	Q92600	299 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	OSTF1	Q92882	214 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	STARD4	Q96DR4	205 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SPDL1	Q96EA4	605 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	MRGPRX4	Q96LA9	322 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	KLHL15	Q96M94	604 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	RBM24	Q9BX46	236 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	PRRG4	Q9BZD6	226 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	PAIP1	Q9H074	479 aa	Known RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	OPN3	Q9H1Y3	402 aa	Predicted RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	PIGM	Q9H3S5	423 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SLC24A3	Q9HC58	644 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	MCCC2	Q9HCC0	563 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	NPHS2	Q9NP85	383 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SLC52A3	Q9NQ40	469 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	GALNT8	Q9NY28	637 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CRIM1	Q9NZV1	1036 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CCDC167	Q9P0B6	97 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	FOXD3	Q9UJU5	478 aa	Predicted RBP	7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	DCTN4	Q9UJW0	460 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CLEC4A	Q9UMR7	237 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	SLC35A3	Q9Y2D2	325 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	PCDHB14	Q9Y5E9	798 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	CREBBP	Q92793	2442 aa		7.52	□□□□□ -1.21
CCT3-208	ENST00000415548	MPDZ	O75970	2070 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548		A0A096LPI6	279 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548		A0A0G2JND7	137 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	AGAP5	A6NIR3	686 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548		A8MXE2	369 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	ETV2	O00321	342 aa	Predicted RBP	7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	ADAM11	O75078	769 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	TFPT	P0C1Z6	253 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	FCGR2A	P12318	317 aa		7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	NCF2	P19878	526 aa	Predicted RBP	7.51	□□□□□ -1.21
CCT3-208	ENST00000415548	PGC	P20142	388 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms