RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SRSF5Q13243 272 aaKnown RBP13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 SNTB2Q13425 540 aaKnown RBP13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 RTL4Q6ZR62 310 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 MBOAT2Q6ZWT7 520 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNF614Q8N883 585 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 OR2A1Q8NGT9 310 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNRF4Q8WWF5 429 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 TEAD3Q99594 435 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 DPEP2Q9H4A9 486 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 RANBP3Q9H6Z4 567 aaPredicted RBP13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 EMC7Q9NPA0 242 aa13.53□□□□□ -0.24
SEMA3F-202ENST00000413852 TCRBV16S1A1N1A0A5B0 115 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 IRGMA1A4Y4 181 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 TSPAN11A1L157 253 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 KLF4O43474 513 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 FGF18O76093 207 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 HIST1H1TP22492 207 aaPredicted RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ATP5A1P25705 553 aaKnown RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 BLVRAP53004 296 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 PLPP4Q5VZY2 271 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 OTPQ5XKR4 325 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 FIGNL1Q6PIW4 674 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 FRRS1Q6ZNA5 592 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNF433Q8N7K0 673 aaPredicted RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 UXS1Q8NBZ7 420 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 OR52B4Q8NGK2 314 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ZCCHC10Q8TBK6 192 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 LGALS14Q8TCE9 139 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ADAMTS15Q8TE58 950 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 NXPE2Q96DL1 559 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 KCNN2Q9H2S1 579 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 SLC6A20Q9NP91 592 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 C12orf4Q9NQ89 552 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 NANSQ9NR45 359 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 SIDT1Q9NXL6 827 aaKnown RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 MARK1Q9P0L2 795 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 KIAA1549LQ6ZVL6 1849 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 UCHL1P09936 223 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 POLR2CP19387 275 aaPredicted RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 RAB3BP20337 219 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 RBMS1P29558 406 aaKnown RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 STAT5AP42229 794 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ERVFC1P60507 584 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ST8SIA6P61647 398 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNF782Q6ZMW2 699 aaPredicted RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 PGLYRP3Q96LB9 341 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 PRSS27Q9BQR3 290 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 NT5DC2Q9H857 520 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 TRIM36Q9NQ86 728 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 WASH6PQ9NQA3 447 aa13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.24
SEMA3F-202ENST00000413852 LAMA1P25391 3075 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 UNC119BA6NIH7 251 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 SMAD9O15198 467 aaKnown RBP13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 RHOP08100 348 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 ANXA7P20073 488 aaKnown RBP13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 GDNFP39905 211 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 DHCR24Q15392 516 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 DUSP5Q16690 384 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 TRMT12Q53H54 448 aaKnown RBP13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 SLC25A25Q6KCM7 469 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 CDC73Q6P1J9 531 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF671Q8TAW3 534 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 SMPDL3BQ92485 455 aa13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 CLEC4MQ9H2X3 399 aaPredicted RBP13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 MDC1Q14676 2089 aaKnown RBP13.52□□□□□ -0.25
SEMA3F-202ENST00000413852 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 ACOD1A6NK06 481 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 LILRB3O75022 631 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 KIAA1024LP59773 190 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 GNA13Q14344 377 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 ALKAL2Q6UX46 152 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 GRASPQ7Z6J2 395 aaPredicted RBP13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 RELTQ969Z4 430 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 GIMAP5Q96F15 307 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 C20orf85Q9H1P6 137 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 KCNE5Q9UJ90 142 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 TRIOO75962 3097 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 ARPC1BO15143 372 aaKnown RBP13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 CASC3O15234 703 aaKnown RBP13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 OR5F1O95221 314 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 SLC35G4P0C7Q5 338 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 F3P13726 295 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 CSNK2A2P19784 350 aaPredicted RBP13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 CXCL2P19875 107 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF136P52737 540 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 FOXK2Q01167 660 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 GALEQ14376 348 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 KRT33BQ14525 404 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 DECR1Q16698 335 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 FAAH2Q6GMR7 532 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 ABHD17CQ6PCB6 329 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 CMTM4Q8IZR5 234 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 RSPRY1Q96DX4 576 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 PTCHD1Q96NR3 888 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 DMRTA2Q96SC8 542 aa13.51□□□□□ -0.25
SEMA3F-202ENST00000413852 NDC1Q9BTX1 674 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms