RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GLRA3O75311 464 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 PROCP04070 461 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FAM157CP0CG43 387 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 EDNRAP25101 427 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NUDT6P53370 316 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SUMO3P55854 103 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 DNAJB13P59910 316 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RAC3P60763 192 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RPL38P63173 70 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RASGEF1BQ0VAM2 473 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NDUFAF6Q330K2 333 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 C6orf52Q5T4I8 152 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 OR2T11Q8NH01 316 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 MZB1Q8WU39 189 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF524Q96C55 264 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 FCRL1Q96LA6 429 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 MRGPRX4Q96LA9 322 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ADAD1Q96M93 576 aaKnown RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ANKZF1Q9H8Y5 726 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NPAP1Q9NZP6 1156 aa12.6□□□□□ -0.39
HLA-DQB2-229ENST00000411527 AZIN1O14977 448 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 LINC00032P0C843 101 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GGT1P19440 569 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 IGHV1-2P23083 117 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 IRX1P78414 480 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 SELENBP1Q13228 472 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TMEM249Q2WGJ8 235 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CCDC153Q494R4 210 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 GALNTL6Q49A17 601 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 DCST2Q5T1A1 773 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CDC73Q6P1J9 531 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF100Q8IYN0 542 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF614Q8N883 585 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 OR10H5Q8NGA6 315 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ADAMTS15Q8TE58 950 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 MTERF3Q96E29 417 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ZNF300Q96RE9 604 aaPredicted RBP12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 TNFRSF13CQ96RJ3 184 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CACNG6Q9BXT2 260 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 ACTRT3Q9BYD9 372 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 C12orf65Q9H3J6 166 aaKnown RBP12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 CDC42EP3Q9UKI2 254 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 KCNE3Q9Y6H6 103 aa12.59□□□□□ -0.39
HLA-DQB2-229ENST00000411527 NUP214P35658 2090 aaPredicted RBP12.58□□□□□ -0.39
HLA-DQB2-229ENST00000411527 A0A096LNT2 108 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 SMAD9O15198 467 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PLIN3O60664 434 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CYTIPO60759 359 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PGM3O95394 542 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 NEFHP12036 1026 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CPA3P15088 417 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TTKP33981 857 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ASMTP46597 345 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CCT5P48643 541 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CCT3P49368 545 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ATP12AP54707 1039 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 DSCR9P59020 149 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TP53BP2Q13625 1128 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 MLC1Q15049 377 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 QPRTQ15274 297 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ARL13AQ5H913 290 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 SLC25A53Q5H9E4 307 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CLEC2AQ6UVW9 174 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 SSX8Q7RTT4 187 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 R3HCC1LQ7Z5L2 792 aaKnown RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 GALNT5Q7Z7M9 940 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 P2RY8Q86VZ1 359 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TMCO5AQ8N6Q1 288 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ZNF433Q8N7K0 673 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CCDC63Q8NA47 563 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 OR7A2PQ8NGA2 310 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ZNF75CPQ92670 426 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 HTRA1Q92743 480 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 RADILQ96JH8 1075 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 BEX2Q9BXY8 128 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TUBB1Q9H4B7 451 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CBLN4Q9NTU7 201 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 FAF1Q9UNN5 650 aaPredicted RBP12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
HLA-DQB2-229ENST00000411527 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 E7EQL1 145 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 LSM1O15116 133 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ZNF264O43296 627 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 BCKDHAP12694 445 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 DDX5P17844 614 aaKnown RBP12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 COX5AP20674 150 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CCR4P51679 360 aa12.57□□□□□ -0.4
HLA-DQB2-229ENST00000411527 LOXL1Q08397 574 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms