RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
SNX13-202ENST00000409604 OSTF1Q92882 214 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 SLC46A1Q96NT5 459 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 C1QTNF6Q9BXI9 259 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 FN3KQ9H479 309 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 SERHL2Q9H4I8 314 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 C19orf53Q9UNZ5 99 aaPredicted RBP10.53□□□□□ -0.72
SNX13-202ENST00000409604 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 IGHV3-15A0A0B4J1V0 119 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 TNFRSF10AO00220 468 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 POU3F2P20265 443 aaPredicted RBP10.53□□□□□ -0.72
SNX13-202ENST00000409604 EDNRAP25101 427 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 STARP49675 285 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 AGFG1P52594 562 aaKnown RBP10.53□□□□□ -0.72
SNX13-202ENST00000409604 CAMK2DQ13557 499 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 NADK2Q4G0N4 442 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 ATP1A1-AS1Q5TC04 95 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 BCORP1Q8N888 145 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 OR1N1Q8NGS0 311 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 PFN4Q8NHR9 129 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 HTRA1Q92743 480 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 PINK1Q9BXM7 581 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 MYEF2Q9P2K5 600 aaKnown RBP10.53□□□□□ -0.72
SNX13-202ENST00000409604 COMMD3Q9UBI1 195 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 LAMP5Q9UJQ1 280 aa10.53□□□□□ -0.72
SNX13-202ENST00000409604 CCDC187A0A096LP49 1063 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 SMIM31A0A1B0GVY4 71 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 C7orf72A4D263 438 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 TNFSF14O43557 240 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 TIAF1O95411 115 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 APOA1P02647 267 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 MICAQ29983 383 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 ARMCX4Q5H9R4 360 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 MSRB3Q8IXL7 192 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 TEX19Q8NA77 164 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 SLC7A13Q8TCU3 470 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 SAP25Q8TEE9 199 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 NDUFAF4Q9P032 175 aa10.52□□□□□ -0.72
SNX13-202ENST00000409604 ACOT7O00154 380 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 RRP8O43159 456 aaKnown RBP10.52□□□□□ -0.73
SNX13-202ENST00000409604 MT-ND2P03891 347 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 FBXO45P0C2W1 286 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 ITGADQ13349 1161 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 QPRTQ15274 297 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 ADRM1Q16186 407 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 KCTD21Q4G0X4 260 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 RPTNQ6XPR3 784 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 SLCO6A1Q86UG4 719 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 MESP1Q9BRJ9 268 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 OR52D1Q9H346 318 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 STMND1H3BQB6 276 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 GFRA3O60609 400 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 RASAL1O95294 804 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 DDAH2O95865 285 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 WNT3P56703 355 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 MRPS15P82914 257 aaKnown RBP10.52□□□□□ -0.73
SNX13-202ENST00000409604 APOFQ13790 326 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 CARTPTQ16568 116 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 NKG7Q16617 165 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 COL28A1Q2UY09 1125 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 CHST4Q8NCG5 386 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 C12orf49Q9H741 205 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 NT5DC2Q9H857 520 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 PRRC2CQ9Y520 2896 aaKnown RBP10.52□□□□□ -0.73
SNX13-202ENST00000409604 TCRBV3S1A0A5B6 114 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 ANXA2P07355 339 aaKnown RBP10.52□□□□□ -0.73
SNX13-202ENST00000409604 C21orf33P30042 268 aaPredicted RBP10.52□□□□□ -0.73
SNX13-202ENST00000409604 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 C6orf141Q5SZD1 244 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 LAIR1Q6GTX8 287 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 GALNTL5Q7Z4T8 443 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 WDR5BQ86VZ2 330 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 PTOV1Q86YD1 416 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 B3GNT7Q8NFL0 401 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 NPRL2Q8WTW4 380 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 DNASE2BQ8WZ79 361 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 PITX2Q99697 317 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 CALHM2Q9HA72 323 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 TAS2R16Q9NYV7 291 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 PCDHGA8Q9Y5G5 932 aa10.52□□□□□ -0.73
SNX13-202ENST00000409604 SLC16A7O60669 478 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 KRT8P05787 483 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 RPS6KA3P51812 740 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 DMRTC1Q5HYR2 192 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 SLC35D2Q76EJ3 337 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 MAMDC2Q7Z304 686 aaPredicted RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 ATCAYQ86WG3 371 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 KLBQ86Z14 1044 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 LRRC18Q8N456 261 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 ORAI3Q9BRQ5 295 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 KATNB1Q9BVA0 655 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 HDHD5Q9BXW7 423 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 MRPS26Q9BYN8 205 aaKnown RBP10.51□□□□□ -0.73
SNX13-202ENST00000409604 GORASP2Q9H8Y8 452 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 CCNB1IP1Q9NPC3 277 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 AGPAT4Q9NRZ5 378 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 NKIRAS2Q9NYR9 191 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 C4orf51C9J302 202 aa10.51□□□□□ -0.73
SNX13-202ENST00000409604 AKR7A3O95154 331 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms