RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CHRNEQ04844 493 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 TCHHL1Q5QJ38 904 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 KLHL17Q6TDP4 642 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 CYS1Q717R9 158 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 ZNF300Q96RE9 604 aaPredicted RBP11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 CCDC134Q9H6E4 229 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 TRAF6Q9Y4K3 522 aa11.28□□□□□ -0.6
CHRNA1-203ENST00000409219 GNG14A0A1W2PPG7 69 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 GMNCA6NCL1 334 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 SMIM23A6NLE4 172 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 C9JVG2 144 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 KLHL2O95198 593 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 NGFRP08138 427 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 CHN1P15882 459 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 GABRA3P34903 492 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 PRIM2P49643 509 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 NCBP2P52298 156 aaKnown RBP eCLIP11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 HEPACAMQ14CZ8 416 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 SWI5Q1ZZU3 235 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 PRR31Q5SQ13 230 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 RINLQ6ZS11 566 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 C3orf62Q6ZUJ4 267 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 CCDC91Q7Z6B0 441 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 C16orf78Q8WTQ4 265 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 ZNF775Q96BV0 537 aaPredicted RBP11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 MYNNQ9NPC7 610 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 NMRK1Q9NWW6 199 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 METRNQ9UJH8 293 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 ZNF225Q9UK10 706 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 SNX6Q9UNH7 406 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 ATP23Q9Y6H3 246 aa11.27□□□□□ -0.6
CHRNA1-203ENST00000409219 A0A0G2JK05 382 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 FAM157AC9JC47 383 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 STX16-NPEPL1H3BU86 382 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 NDUFAB1O14561 156 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 STX16O14662 325 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 SLITRK5O94991 958 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 TSPAN8P19075 237 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 PHC1P78364 1004 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 DEFA6Q01524 100 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 CD226Q15762 336 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 ZSWIM7Q19AV6 140 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 MST1LQ2TV78 715 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 TMEM176BQ3YBM2 270 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 KLC3Q6P597 504 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 ZAR1Q86SH2 424 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 ANKS4BQ8N8V4 417 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 ZNF75CPQ92670 426 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 GCDHQ92947 438 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 FBXO17Q96EF6 278 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 CCT8L2Q96SF2 557 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 SHCBP1LQ9BZQ2 653 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 GLIPR2Q9H4G4 154 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 C3orf14Q9HBI5 128 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 HHATLQ9HCP6 504 aa11.26□□□□□ -0.61
CHRNA1-203ENST00000409219 A0A1W2PNR3 127 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 HMX2A2RU54 273 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 SERINC4A6NH21 518 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 EBAG9O00559 213 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 OR4F21O95013 312 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 OTCP00480 354 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 IGHV3-9P01782 118 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 RPS17P08708 135 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 GCAP28676 217 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 TIA1P31483 386 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 PHBP35232 272 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 EIF1P41567 113 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 RASGEF1BQ0VAM2 473 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 DEF8Q6ZN54 512 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 PLD6Q8N2A8 252 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 FBXO27Q8NI29 283 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 ELP4Q96EB1 424 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 APIPQ96GX9 242 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 C1QTNF6Q9BXI9 259 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 EBPLQ9BY08 206 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 METTL17Q9H7H0 456 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 EQTNQ9NQ60 294 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 NTMQ9P121 344 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 A0A096LPK6 155 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 EXOC1LA0A1B0GW35 172 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 CIB4A0PJX0 185 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 GJE1A6NN92 205 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 ZNF724A8MTY0 619 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 ATP6V1G2-DDX39BF2Z307 99 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 ZNF195O14628 629 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 CYTIPO60759 359 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 RGS9O75916 674 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 NKX2-2O95096 273 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 HSD3B1P14060 373 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 CREB1P16220 341 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 DDCP20711 480 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 HSD3B2P26439 372 aa11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 APEX1P27695 318 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-203ENST00000409219 MAP3K8P41279 467 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms