RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 NRIP3Q9NQ35 241 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 LUZP4Q9P127 313 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 NDRG3Q9UGV2 375 aa16.58■□□□□ 0.25
SMPD4-202ENST00000409031 ZNF142P52746 1687 aaPredicted RBP16.58■□□□□ 0.25
SMPD4-202ENST00000409031 MED6O75586 246 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 CDC123O75794 336 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-202ENST00000409031 C8AP07357 584 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 FBXO45P0C2W1 286 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 HTR1FP30939 366 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 CCR7P32248 378 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 OR13C3Q8NGS6 347 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF461Q8TAF7 563 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 SLC38A5Q8WUX1 472 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 KLHL15Q96M94 604 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 PELI2Q9HAT8 420 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 A0A1W2PRU2 124 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 RPS2P15880 293 aaKnown RBP16.58■□□□□ 0.24
SMPD4-202ENST00000409031 LMAN2Q12907 356 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF805Q5CZA5 627 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 SLC18B1Q6NT16 456 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 VITQ6UXI7 678 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 KIAA1958Q8N8K9 716 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 ACTL7AQ9Y615 435 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 ZAR1LA6NP61 321 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 VEGFDO43915 354 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 APODP05090 189 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 PSMB10P40306 273 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 PPT1P50897 306 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 ZMAT1Q5H9K5 638 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 C12orf40Q86WS4 652 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 RHNO1Q9BSD3 238 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF629Q9UEG4 869 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-202ENST00000409031 SLC23A1Q9UHI7 598 aa16.58■□□□□ 0.24
SMPD4-202ENST00000409031 TSPAN11A1L157 253 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 AGAP14A8MT82 685 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 NUDT19A8MXV4 375 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 GPR89AB7ZAQ6 455 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 GPR89BP0CG08 455 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ZP3P21754 424 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 BAMBIQ13145 260 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SYPL1Q16563 259 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 LRRTM3Q86VH5 581 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SLC35F3Q8IY50 421 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 BPIFA2Q96DR5 249 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 HIST1H2AAQ96QV6 131 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SERINC1Q9NRX5 453 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF281Q9Y2X9 895 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 AKAP11Q9UKA4 1901 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 MEIS3P1A6NDR6 274 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-202ENST00000409031 LEFTY1O75610 366 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SPI1P17947 270 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 BCL2A1Q16548 175 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SYT14P1Q58G82 188 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 PAAF1Q9BRP4 392 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 RLIMQ9NVW2 624 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ZMAT5Q9UDW3 170 aaKnown RBP16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF175Q9Y473 711 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF840PA6NDX5 716 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 STMND1H3BQB6 276 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SCO2O43819 266 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 WASP42768 502 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 XCR1P46094 333 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 PRPS1P60891 318 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ZNF440Q8IYI8 595 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 OR10Z1Q8NGY1 313 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 LINC01599Q8WXQ3 324 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 AUTS2Q8WXX7 1259 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ST6GAL2Q96JF0 529 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 WDFY2Q96P53 400 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 IL21RQ9HBE5 538 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ACSS1Q9NUB1 689 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SLC31A1O15431 190 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 IFNGR1P15260 489 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SRP9P49458 86 aaKnown RBP16.57■□□□□ 0.24
SMPD4-202ENST00000409031 FKBP1BP68106 108 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 YIF1BQ5BJH7 314 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 PAQR9Q6ZVX9 377 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 BCDIN3DQ7Z5W3 292 aaKnown RBP16.57■□□□□ 0.24
SMPD4-202ENST00000409031 SFXN5Q8TD22 340 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ST7LQ8TDW4 575 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 ACER3Q9NUN7 267 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 PRSS21Q9Y6M0 314 aa16.57■□□□□ 0.24
SMPD4-202ENST00000409031 PIGBOS1A0A0B4J2F0 54 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 A8MVJ9 347 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 FCRLBQ6BAA4 426 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 PXYLP1Q8TE99 480 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 UCN3Q969E3 161 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 SYT3Q9BQG1 590 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 SLC6A20Q9NP91 592 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 TMEFF2Q9UIK5 374 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-202ENST00000409031 IER3IP1Q9Y5U9 82 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 FEZF1A0PJY2 475 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 SYN1P17600 705 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 GDF6Q6KF10 455 aaPredicted RBP16.56■□□□□ 0.24
SMPD4-202ENST00000409031 KLHDC8AQ8IYD2 350 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 NPLOC4Q8TAT6 608 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 TTC9Q92623 222 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 LRFN1Q9P244 771 aa16.56■□□□□ 0.24
SMPD4-202ENST00000409031 A0A0A6YYH2 397 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms