RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 WFDC11Q8NEX6 87 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 ZFP90Q8TF47 636 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 OSTF1Q92882 214 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 CPNE4Q96A23 557 aaPredicted RBP13.72□□□□□ -0.21
TPM1-207ENST00000403994 MRGPRX4Q96LA9 322 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 HS3ST6Q96QI5 342 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 OR51I1Q9H343 314 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
TPM1-207ENST00000403994 BEX4Q9NWD9 120 aaPredicted RBP13.72□□□□□ -0.21
TPM1-207ENST00000403994 SERINC4A6NH21 518 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 DUXAA6NLW8 204 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 GJE1A6NN92 205 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 E9PBE3 544 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 FCMRO60667 390 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 DIAPH2O60879 1101 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 STX11O75558 287 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 THBDP07204 575 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 ALDOCP09972 364 aaKnown RBP13.71□□□□□ -0.21
TPM1-207ENST00000403994 LBPP18428 481 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 KHKP50053 298 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 CBFBQ13951 182 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 CASP8Q14790 479 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 GPR68Q15743 365 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 ARHGAP11BQ3KRB8 267 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 FAM174BQ3ZCQ3 159 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 SLC25A53Q5H9E4 307 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 ANXA8L1Q5VT79 327 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 SAXO2Q658L1 398 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 ANKRD34AQ69YU3 496 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 HEPHL1Q6MZM0 1159 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 TNFAIP8L2Q6P589 184 aaPredicted RBP13.71□□□□□ -0.21
TPM1-207ENST00000403994 ANKRD42Q8N9B4 389 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 ROBO4Q8WZ75 1007 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 PAIP2Q9BPZ3 127 aaKnown RBP13.71□□□□□ -0.21
TPM1-207ENST00000403994 C12orf49Q9H741 205 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 TIGARQ9NQ88 270 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 KLHL13Q9P2N7 655 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 MKLN1Q9UL63 735 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 PCDHGB4Q9UN71 923 aa13.71□□□□□ -0.21
TPM1-207ENST00000403994 DSCAMO60469 2012 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 SDHDO14521 159 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 DNAJA2O60884 412 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 UGT2B17O75795 530 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 PABPC4LP0CB38 370 aaKnown RBP13.7□□□□□ -0.22
TPM1-207ENST00000403994 PPP3CBP16298 524 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 UQCRC2P22695 453 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 SLC7A1P30825 629 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
TPM1-207ENST00000403994 TMEM176BQ3YBM2 270 aaPredicted RBP13.7□□□□□ -0.22
TPM1-207ENST00000403994 HHATQ5VTY9 493 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 C3orf33Q6P1S2 294 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 TFAP2EQ6VUC0 442 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 BEND4Q6ZU67 534 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 FCRLAQ7L513 359 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 CROCCP2Q86T23 111 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 FAM71CQ8NEG0 241 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 ATP6V1C2Q8NEY4 427 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 NEURL3Q96EH8 262 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 REXO5Q96IC2 774 aaKnown RBP13.7□□□□□ -0.22
TPM1-207ENST00000403994 TEX37Q96LM6 180 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 CCDC115Q96NT0 180 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 LAT2Q9GZY6 243 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 UBTD1Q9HAC8 227 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 EXD2Q9NVH0 621 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 AIG1Q9NVV5 245 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 TLN2Q9Y4G6 2542 aa13.7□□□□□ -0.22
TPM1-207ENST00000403994 TMEM120BA0PK00 339 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 C9JVG2 144 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 SNNO75324 88 aaPredicted RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 BCAS1O75363 584 aaPredicted RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 CYP7B1O75881 506 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 H6PDO95479 791 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 AGR2O95994 175 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 CSTAP01040 98 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 UBTFL6P0CB48 400 aaPredicted RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 OR12D1P0DN82 309 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 HOXC12P31275 282 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 NME5P56597 212 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 MAPK14Q16539 360 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 GTF2IRD2BQ6EKJ0 949 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 TYW3Q6IPR3 259 aaKnown RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 FRRS1Q6ZNA5 592 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 GTF2IRD2Q86UP8 949 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 VPS37AQ8NEZ2 397 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 OIT3Q8WWZ8 545 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 ST8SIA1Q92185 356 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 RAB8BQ92930 207 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 SLC35A5Q9BS91 424 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 THUMPD3Q9BV44 507 aaKnown RBP13.69□□□□□ -0.22
TPM1-207ENST00000403994 ACTR6Q9GZN1 396 aa13.69□□□□□ -0.22
TPM1-207ENST00000403994 QRSL1Q9H0R6 528 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms