RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 PRKRAO75569 313 aaKnown RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 RGS19P49795 217 aa17.01■□□□□ 0.31
COL18A1-204ENST00000400337 UBE2J1Q9Y385 318 aaPredicted RBP17.01■□□□□ 0.31
COL18A1-204ENST00000400337 CRTAPO75718 401 aaPredicted RBP17■□□□□ 0.31
COL18A1-204ENST00000400337 UPK1BO75841 260 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 BMP1P13497 986 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 RAB38P57729 211 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 RABEPKQ7Z6M1 372 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 LIX1LQ8IVB5 337 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 SCGB1C1Q8TD33 95 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 MMP2P08253 660 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 PFN3P60673 137 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 CXorf36Q9H7Y0 433 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 TMEM30AQ9NV96 361 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 MAST2Q6P0Q8 1798 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 BLACEA4D250 179 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 REEP5Q00765 189 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF91Q05481 1191 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 EEF1A2Q05639 463 aaKnown RBP17■□□□□ 0.31
COL18A1-204ENST00000400337 LTB4RQ15722 352 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF322Q6U7Q0 402 aaPredicted RBP17■□□□□ 0.31
COL18A1-204ENST00000400337 SERPINA12Q8IW75 414 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF595Q8IYB9 648 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 NAT6Q93015 286 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 CD34P28906 385 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 EIF2S3P41091 472 aaKnown RBP17■□□□□ 0.31
COL18A1-204ENST00000400337 CFAP77Q6ZQR2 320 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 OR51T1Q8NGJ9 327 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 SNIP1Q8TAD8 396 aaKnown RBP17■□□□□ 0.31
COL18A1-204ENST00000400337 TESQ9UGI8 421 aaKnown RBP17■□□□□ 0.31
COL18A1-204ENST00000400337 TMPRSS11EQ9UL52 423 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 A0A1B0GUL6 1792 aa17■□□□□ 0.31
COL18A1-204ENST00000400337 DAPP51397 102 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 FUNDC1Q8IVP5 155 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 NXPE3Q969Y0 559 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 CPNE5Q9HCH3 593 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 PLEK2Q9NYT0 353 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 GFRA2O00451 464 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 KCNK5O95279 499 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 MSX1P28360 303 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 GPR18Q14330 331 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 TBCEQ15813 527 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-204ENST00000400337 OTUD1Q5VV17 481 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-204ENST00000400337 ELMOD2Q8IZ81 293 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 OR13C2Q8NGS9 318 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 HAVCR2Q8TDQ0 301 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 MMP28Q9H239 520 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 EPHX3Q9H6B9 360 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 HTR3AP46098 478 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 CSNK2A1P68400 391 aaPredicted RBP16.99■□□□□ 0.31
COL18A1-204ENST00000400337 CSNK2A3Q8NEV1 391 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 BABAM2Q9NXR7 383 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 PCDH10Q9P2E7 1040 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 REV1Q9UBZ9 1251 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 ZNF175Q9Y473 711 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 ZFAND5O76080 213 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 ACP2P11117 423 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 TSPAN31Q12999 210 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 TMEM150AQ86TG1 271 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 CDH20Q9HBT6 801 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 F13BP05160 661 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 NPPBP16860 134 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 C17orf50Q8WW18 174 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 NANOS1Q8WY41 292 aaKnown RBP16.99■□□□□ 0.31
COL18A1-204ENST00000400337 ITFG2Q969R8 447 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 MSANTD3Q96H12 275 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 DNTTIP1Q9H147 329 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 TUBB1Q9H4B7 451 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 MAN2C1Q9NTJ4 1040 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 SACM1LQ9NTJ5 587 aa16.99■□□□□ 0.31
COL18A1-204ENST00000400337 CD79AP11912 226 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 IDUAP35475 653 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 CSNK1A1P48729 337 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 CASP6P55212 293 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 FGL1Q08830 312 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 TMEM52BQ4KMG9 183 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 COX20Q5RI15 118 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 GSG1LQ6UXU4 331 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 PELI3Q8N2H9 469 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 EID2Q8N6I1 236 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 TMEM102Q8N9M5 508 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-204ENST00000400337 TM4SF18Q96CE8 201 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 SLC39A1Q9NY26 324 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 EGFP01133 1207 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 HOXB9P17482 250 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-204ENST00000400337 NR4A2P43354 598 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 GPR50Q13585 617 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 PDE7AQ13946 482 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 OR2G6Q5TZ20 316 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 CYP4V2Q6ZWL3 525 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-204ENST00000400337 CCDC28AQ8IWP9 274 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 P2RY12Q9H244 342 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 SLC6A5Q9Y345 797 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 A6NIN4 97 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 EEF1A1P68104 462 aaKnown RBP16.98■□□□□ 0.31
COL18A1-204ENST00000400337 BCL7AQ4VC05 210 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 SPRED1Q7Z699 444 aa16.98■□□□□ 0.31
COL18A1-204ENST00000400337 DRAXINQ8NBI3 349 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms