RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 ACSS1Q9NUB1 689 aaPredicted RBP8.74□□□□□ -1.01
NIFKP1-201ENST00000398317 PAQR5Q9NXK6 330 aaPredicted RBP8.74□□□□□ -1.01
NIFKP1-201ENST00000398317 GIN1Q9NXP7 522 aa8.74□□□□□ -1.01
NIFKP1-201ENST00000398317 GIMAP2Q9UG22 337 aa8.74□□□□□ -1.01
NIFKP1-201ENST00000398317 CR1P17927 2039 aa8.74□□□□□ -1.01
NIFKP1-201ENST00000398317 CUBNO60494 3623 aa8.74□□□□□ -1.01
NIFKP1-201ENST00000398317 C7orf72A4D263 438 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 EFNA2O43921 213 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 IGLV1-40P01703 118 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 HMGN2P05204 90 aaKnown RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 TUBBP07437 444 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 CHRNGP07510 517 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 LINGO3P0C6S8 592 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 NEFHP12036 1026 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 BCKDHAP12694 445 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 KRT4P19013 534 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 RAB6AP20340 208 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ATP5J2P56134 94 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 POU6F2P78424 691 aaPredicted RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF117Q03924 483 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 PDE7AQ13946 482 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 LASP1Q14847 261 aaKnown RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 PCLAFQ15004 111 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 NDUFAF6Q330K2 333 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 PDSS1Q5T2R2 415 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 KANK2Q63ZY3 851 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ZCCHC12Q6PEW1 402 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 CBLN3Q6UW01 205 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 LRIG3Q6UXM1 1119 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 NUFIP2Q7Z417 695 aaKnown RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 STK32CQ86UX6 486 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 TRABD2AQ86V40 505 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 MISPQ8IVT2 679 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 TUSC5Q8IXB3 177 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 DDIASQ8IXT1 998 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF619Q8N2I2 560 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 LRRN4CLQ8ND94 238 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ATP6V1C2Q8NEY4 427 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 OR7A2PQ8NGA2 310 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 KIF18AQ8NI77 898 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ABHD3Q8WU67 409 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 UBLCP1Q8WVY7 318 aaPredicted RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 AKAP1Q92667 903 aaKnown RBP eCLIP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 S100PBPQ96BU1 408 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 BTBD2Q9BX70 525 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 HEATR1Q9H583 2144 aaKnown RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 CXorf56Q9H5V9 222 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 GLRX2Q9NS18 164 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ZCCHC3Q9NUD5 404 aaKnown RBP8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 LAMP3Q9UQV4 416 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 GPR52Q9Y2T5 361 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 DNAJC15Q9Y5T4 150 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 SNX8Q9Y5X2 465 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 ACTL7BQ9Y614 415 aa8.73□□□□□ -1.01
NIFKP1-201ENST00000398317 IGHV3-15A0A0B4J1V0 119 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 A0A1W2PQD3 144 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF195O14628 629 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 PIP5K1BO14986 540 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TRIM13O60858 407 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 GCM2O75603 506 aaPredicted RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 NUDT14O95848 222 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 CHEK2O96017 543 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 LAMP1P11279 417 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 PAX1P15863 534 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 PSMB1P20618 241 aaKnown RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 LCN1P31025 176 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ASMTP46597 345 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 PPP2R2BQ00005 443 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TNK1Q13470 666 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 CAPRIN1Q14444 709 aaKnown RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TOMM34Q15785 309 aaPredicted RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF239Q16600 458 aaKnown RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TMEM176BQ3YBM2 270 aaPredicted RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 RPS26P11Q5JNZ5 115 aaPredicted RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 GTF2IRD2BQ6EKJ0 949 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 CDC73Q6P1J9 531 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TFAP2EQ6VUC0 442 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 R3HCC1LQ7Z5L2 792 aaKnown RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 GTF2IRD2Q86UP8 949 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TDRPQ86YL5 185 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF611Q8N823 705 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 MAPK1IP1LQ8NDC0 245 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 FBXO27Q8NI29 283 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 AGR3Q8TD06 166 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 RNF128Q8TEB7 428 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TWIST2Q8WVJ9 160 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 NEUROG1Q92886 237 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF524Q96C55 264 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 REXO5Q96IC2 774 aaKnown RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TACO1Q9BSH4 297 aaKnown RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TMEM204Q9BSN7 226 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 MECRQ9BV79 373 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 HHATLQ9HCP6 504 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 FANCFQ9NPI8 374 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ZNF701Q9NV72 531 aaPredicted RBP8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 ATP6V1HQ9UI12 483 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 CARD8Q9Y2G2 431 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 TMED5Q9Y3A6 229 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 KCNE3Q9Y6H6 103 aa8.72□□□□□ -1.01
NIFKP1-201ENST00000398317 C9JVG2 144 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms