RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 CCDC22O60826 627 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 BCHEP06276 602 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 ETS2P15036 469 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 HTR3AP46098 478 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 CCR4P51679 360 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 MAP2K6P52564 334 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SUCLG1P53597 346 aaKnown RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 CLDN15P56746 228 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 QPRTQ15274 297 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 CDSNQ15517 529 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 MAPK11Q15759 364 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 LIN52Q52LA3 116 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 DHDDSQ86SQ9 333 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 GGNQ86UU5 652 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 UBQLNLQ8IYU4 475 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 LILRA2Q8N149 483 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 OR5M1Q8NGP8 315 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 FBXO27Q8NI29 283 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 BBS10Q8TAM1 723 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SLC35B4Q969S0 331 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SH3GL1Q99961 368 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SPOCK3Q9BQ16 436 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 THUMPD3Q9BV44 507 aaKnown RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SFXN3Q9BWM7 321 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SAR1AQ9NR31 198 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 SERINC1Q9NRX5 453 aa12.86□□□□□ -0.35
HDDC2-202ENST00000398153 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 FOXD3Q9UJU5 478 aaPredicted RBP12.86□□□□□ -0.35
HDDC2-202ENST00000398153 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 SLC22A20A6NK97 555 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 C5orf58C9J3I9 102 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 OIP5O43482 229 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 CYP7B1O75881 506 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 ZNF136P52737 540 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 CLDN20P56880 219 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 TFF3Q07654 80 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 RBBP4Q09028 425 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 FOXF1Q12946 379 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 KLF10Q13118 480 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 CYLC2Q14093 348 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 SGCBQ16585 318 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 GCNT6Q5T4J0 391 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 RNF220Q5VTB9 566 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 REEP3Q6NUK4 255 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 OLIG3Q7RTU3 272 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 P4HA3Q7Z4N8 544 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 BHLHE22Q8NFJ8 381 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 OR52P1PQ8NH57 321 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 SLC25A43Q8WUT9 341 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 ADGRG7Q96K78 797 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 CGREF1Q99674 301 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 SPATA5L1Q9BVQ7 753 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 NSRP1Q9H0G5 558 aaKnown RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 ENKD1Q9H0I2 346 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 QRSL1Q9H0R6 528 aaKnown RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 ACER3Q9NUN7 267 aa12.85□□□□□ -0.35
HDDC2-202ENST00000398153 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
HDDC2-202ENST00000398153 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 MED12Q93074 2177 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CACNA1CQ13936 2221 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CDHR4A6H8M9 788 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 SYT5O00445 386 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 EIF1AYO14602 144 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 SEC14L5O43304 696 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 PGM3O95394 542 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 PABPC4LP0CB38 370 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 ARAFP10398 606 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CLK1P49759 484 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 ASCL1P50553 236 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 SESN3P58005 492 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 NFYCQ13952 458 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CTU2Q2VPK5 515 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 TRMT5Q32P41 509 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 MMEL1Q495T6 779 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
HDDC2-202ENST00000398153 CRYBG3Q68DQ2 2970 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 GTF2IRD2BQ6EKJ0 949 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 C3orf33Q6P1S2 294 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 ZNF550Q7Z398 422 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 GTF2IRD2Q86UP8 949 aa12.84□□□□□ -0.35
HDDC2-202ENST00000398153 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms