RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 EFCAB9A8MZ26 197 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SULT1B1O43704 296 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SEMA7AO75326 666 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ELK4P28324 431 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 RAB25P57735 213 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 NRN1LQ496H8 165 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ARMCX4Q5H9R4 360 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SLC22A18ASQ8N1D0 253 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ASB17Q8WXJ9 295 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 KCTD7Q96MP8 289 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SLC17A5Q9NRA2 495 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 TM7SF3Q9NS93 570 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 FGF21Q9NSA1 209 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 CUTCQ9NTM9 273 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 RANBP2P49792 3224 aaKnown RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 EML5Q05BV3 1969 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 TACSTD2P09758 323 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 LIMS3P0CW19 117 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 LIMS4P0CW20 117 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF3P17036 446 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 DIO1P49895 249 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 GPR19Q15760 415 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SLC25A53Q5H9E4 307 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 AHSA2Q719I0 299 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 KANSL1Q7Z3B3 1105 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 PLD3Q8IV08 490 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 HS3ST5Q8IZT8 346 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SLC41A3Q96GZ6 507 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 DGAT2Q96PD7 388 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 PRRX2Q99811 253 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 NMNAT2Q9BZQ4 307 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ABRACLQ9P1F3 81 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 TRAV1-2A0A0B4J238 106 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 K7ESF4 209 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF264O43296 627 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 RAB36O95755 333 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 E2F1Q01094 437 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 EBPQ15125 230 aaKnown RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 PON3Q15166 354 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 FNDC7Q5VTL7 733 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ADNP2Q6IQ32 1131 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 SPRED2Q7Z698 418 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF615Q8N8J6 731 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 KCT2Q8NC54 265 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 MAL2Q969L2 176 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 LRR1Q96L50 414 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 NUAK2Q9H093 628 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 TTYH1Q9H313 450 aaPredicted RBP5.42□□□□□ -1.54
PTPRD-206ENST00000397617 ZCCHC4Q9H5U6 513 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 OSGIN1Q9UJX0 560 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 EXPH5Q8NEV8 1989 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 MED12Q93074 2177 aa5.42□□□□□ -1.54
PTPRD-206ENST00000397617 METTL15A6NJ78 407 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 VGLL3A8MV65 326 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TP53I11O14683 189 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PTP4A3O75365 173 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 HLA-DQB1P01920 261 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SYPP08247 313 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 POLR2CP19387 275 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ARL4DP49703 201 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 NRG3P56975 720 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CTU2Q2VPK5 515 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 TMEM205Q6UW68 189 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CDH26Q8IXH8 852 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ANKK1Q8NFD2 765 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SGTBQ96EQ0 304 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 LHPPQ9H008 270 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 LANCL2Q9NS86 450 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FBXW2Q9UKT8 454 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MED13Q9UHV7 2174 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 A0A0J9YVX5 310 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PRAMEF27A3QJZ7 478 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 A6NIZ1 184 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FLRT2O43155 660 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF888P0CJ79 500 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MTNR1BP49286 362 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RAP1BP61224 184 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 RAP1AP62834 184 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 EXT1Q16394 746 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SNAPC1Q16533 368 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MEP1AQ16819 746 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FLYWCH1Q4VC44 716 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 DDI2Q5TDH0 399 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 HLA-DQA1Q5Y7H0 255 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CDS1Q92903 461 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 BPIFA2Q96DR5 249 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 ZNF304Q9HCX3 659 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 MRPL39Q9NYK5 338 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PLPP2O43688 288 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 KCNK2O95069 426 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CD37P11049 281 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 CPEP16870 476 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 PAX7P23759 505 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 GP2P55259 537 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 YBX1P67809 324 aaKnown RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 SLC35F1Q5T1Q4 408 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 FAM69AQ5T7M9 428 aa5.41□□□□□ -1.54
PTPRD-206ENST00000397617 JMJD6Q6NYC1 403 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-206ENST00000397617 OR1N1Q8NGS0 311 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms