RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ADAM10O14672 748 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 NKX2-8O15522 239 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CHP2O43745 196 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 MITFO75030 526 aaPredicted RBP18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 NUDT14O95848 222 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 GASTP01350 101 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 POU2F1P14859 743 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CDH2P19022 906 aaPredicted RBP18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CBLP22681 906 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CASP3P42574 277 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 GAS1P54826 345 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 RRADP55042 308 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CBFBQ13951 182 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 WBP2NLQ6ICG8 309 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ULK3Q6PHR2 472 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 TMEM255BQ8WV15 326 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 CYGBQ8WWM9 190 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 NIPSNAP1Q9BPW8 284 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 PRSS27Q9BQR3 290 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 TOR3AQ9H497 397 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 MGAT4BQ9UQ53 548 aa18.65■□□□□ 0.58
VCPKMT-202ENST00000395860 ARGFXA6NJG6 315 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 LYPD3O95274 346 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 NTN1O95631 604 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 PTGDSP41222 190 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 UGT2B15P54855 530 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 WLSQ5T9L3 541 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 PGBD2Q6P3X8 592 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 BEST3Q8N1M1 668 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 OR5W2Q8NH69 310 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 DNAJA4Q8WW22 397 aaPredicted RBP18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 FGF11Q92914 225 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 GTPBP3Q969Y2 492 aaKnown RBP18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 SECISBP2Q96T21 854 aaKnown RBP18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 PAPOLBQ9NRJ5 636 aaKnown RBP18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 PPP4R1LQ9P1A2 415 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 POFUT2Q9Y2G5 429 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 WIF1Q9Y5W5 379 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 PCNX3Q9H6A9 2034 aa18.64■□□□□ 0.57
VCPKMT-202ENST00000395860 ADAP00813 363 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 WT1P19544 449 aaPredicted RBP18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 PGCP20142 388 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 IFNGR2P38484 337 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 COL28A1Q2UY09 1125 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF468Q5VIY5 522 aaPredicted RBP18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 ABHD17BQ5VST6 288 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 OR5M10Q6IEU7 315 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 KCNE4Q8WWG9 221 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 TFAP2CQ92754 450 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 STMN3Q9NZ72 180 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 LRCH1Q9Y2L9 728 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 LSM11P83369 360 aaKnown RBP eCLIP18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 SNTA1Q13424 505 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 SWT1Q5T5J6 900 aaKnown RBP18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 SLC22A10Q63ZE4 541 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 TMEM81Q6P7N7 255 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 WDR88Q6ZMY6 472 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 MBOAT2Q6ZWT7 520 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF555Q8NEP9 628 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 PIGXQ8TBF5 258 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 TMEM239Q8WW34 195 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 MPP4Q96JB8 637 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 SGCZQ96LD1 299 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 MBOAT4Q96T53 435 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 RIBC2Q9H4K1 309 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 KRCC1Q9NPI7 259 aaPredicted RBP18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 ANKRD10Q9NXR5 420 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 ABI3Q9P2A4 366 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 WASF3Q9UPY6 502 aa18.63■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF891A8MT65 544 aaPredicted RBP18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 DENRO43583 198 aaKnown RBP18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 PTNP21246 168 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 CAPGP40121 348 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 KCNAB2Q13303 367 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 MED21Q13503 144 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 SLC36A3Q495N2 470 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 CMPK2Q5EBM0 449 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 PRAMEF20Q5VT98 475 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 SLC30A6Q6NXT4 461 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 C1orf94Q6P1W5 598 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 RTL4Q6ZR62 310 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 PRICKLE2Q7Z3G6 844 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 NRMQ8IXM6 262 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 GPALPP1Q8IXQ4 340 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 CYP4Z2PQ8N1L4 340 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 GALNT16Q8N428 558 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 PAQR8Q8TEZ7 354 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 C3orf49Q96BT1 292 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 HS6ST2Q96MM7 605 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 KLHDC3Q9BQ90 382 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 DGCR6LQ9BY27 220 aa18.62■□□□□ 0.57
VCPKMT-202ENST00000395860 H0YAE9 185 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 CCL3P10147 92 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 CYB561P49447 251 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 SUMO3P55854 103 aaPredicted RBP18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 ZER1Q7Z7L7 766 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 RNF113BQ8IZP6 322 aaKnown RBP18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 ZNF248Q8NDW4 579 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 GPR119Q8TDV5 335 aa18.61■□□□□ 0.57
VCPKMT-202ENST00000395860 CPNE5Q9HCH3 593 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms