RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 ZFP90Q8TF47 636 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 HOXB13Q92826 284 aaPredicted RBP11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF775Q96BV0 537 aaPredicted RBP11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 TSPAN17Q96FV3 270 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 CDK15Q96Q40 435 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 TRIM31Q9BZY9 425 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 MALT1Q9UDY8 824 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 C19orf53Q9UNZ5 99 aaPredicted RBP11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 MOKQ9UQ07 419 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 GRIP1Q9Y3R0 1128 aa11.88□□□□□ -0.51
VCPKMT-201ENST00000395859 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 PIAS1O75925 651 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 OXSR1O95747 527 aaPredicted RBP11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 GSTA2P09210 222 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 STMN1P16949 149 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 HSD17B3P37058 310 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 MAP3K8P41279 467 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 ALDH9A1P49189 494 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF41P51814 821 aaPredicted RBP11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 SLC12A2P55011 1212 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 RAB10P61026 200 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 RASGEF1BQ0VAM2 473 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 FOXF1Q12946 379 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 GTF2H2Q13888 395 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 TRADDQ15628 312 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 TMEM176BQ3YBM2 270 aaPredicted RBP11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 OR7E24Q6IFN5 339 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 GTF2H2CQ6P1K8 395 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 SHQ1Q6PI26 577 aaKnown RBP11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 C1QL2Q7Z5L3 287 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 NEU4Q8WWR8 484 aaPredicted RBP11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF524Q96C55 264 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 LRRC37BQ96QE4 947 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 FAIM2Q9BWQ8 316 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 RAB1BQ9H0U4 201 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 HHATLQ9HCP6 504 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 CA10Q9NS85 328 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 TAS2R16Q9NYV7 291 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 PCDHB14Q9Y5E9 798 aa11.87□□□□□ -0.51
VCPKMT-201ENST00000395859 DNAH9Q9NYC9 4486 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 CIB4A0PJX0 185 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 GXYLT2A0PJZ3 443 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 E7ESA3 106 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 UPK1AO00322 258 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF195O14628 629 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 TP73O15350 636 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 COQ9O75208 318 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 PNPP00491 289 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 FSHBP01225 129 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 FAM153BP0C7A2 387 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 PRIM2P49643 509 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 PSMD4P55036 377 aaKnown RBP11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 PDIA2Q13087 525 aaKnown RBP11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 RASA2Q15283 850 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 PRSS53Q2L4Q9 553 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 FAM153CQ494X1 144 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 C1QTNF12Q5T7M4 302 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF100Q8IYN0 542 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 SAMD14Q8IZD0 417 aaPredicted RBP11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 OR2L13Q8N349 312 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 RIBC1Q8N443 379 aaPredicted RBP11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 FBXO36Q8NEA4 188 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 CLDND2Q8NHS1 167 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 LRRC58Q96CX6 371 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 DOK1Q99704 481 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 Q9N2J8 555 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 SLC17A5Q9NRA2 495 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 ANGPTL3Q9Y5C1 460 aa11.86□□□□□ -0.51
VCPKMT-201ENST00000395859 MYO1GB0I1T2 1018 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 WNT9BO14905 357 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 OR4A8P0C604 315 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 IFNGR1P15260 489 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 GCH1P30793 250 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 PHBP35232 272 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 ALDH18A1P54886 795 aaKnown RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 MRPS25P82663 173 aaKnown RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 TRAF3Q13114 568 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 CD226Q15762 336 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 ABLIM2Q6H8Q1 611 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 METTL2BQ6P1Q9 378 aaKnown RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 ZAR1Q86SH2 424 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 ANKMY2Q8IV38 441 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 FAM9CQ8IZT9 166 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 ZCCHC24Q8N2G6 241 aaKnown RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 C17orf78Q8N4C9 275 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 TEX29Q8N6K0 151 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 SYT14Q8NB59 555 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 C1orf162Q8NEQ5 155 aaPredicted RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 PYROXD1Q8WU10 500 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 WDR60Q8WVS4 1066 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 CDKL2Q92772 493 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 BOD1Q96IK1 185 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 C1QTNF5Q9BXJ0 243 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms