RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 RTN4RQ9BZR6 473 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 YY1AP1Q9H869 796 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 LIN28AQ9H9Z2 209 aaKnown RBP7.73□□□□□ -1.17
HERC4-203ENST00000395185 EXOSC3Q9NQT5 275 aaKnown RBP7.73□□□□□ -1.17
HERC4-203ENST00000395185 ACER3Q9NUN7 267 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 RLIMQ9NVW2 624 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 DNAJB12Q9NXW2 375 aaKnown RBP7.73□□□□□ -1.17
HERC4-203ENST00000395185 ABCG2Q9UNQ0 655 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 AURKCQ9UQB9 309 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 OSGIN2Q9Y236 505 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 SLC5A6Q9Y289 635 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 SH3GLB1Q9Y371 365 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 PIEZO2Q9H5I5 2752 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 FLNBO75369 2602 aaKnown RBP7.73□□□□□ -1.17
HERC4-203ENST00000395185 MED13Q9UHV7 2174 aa7.73□□□□□ -1.17
HERC4-203ENST00000395185 NPIPA5A0A0B4J1W7 369 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 ANKRD33BA6NCL7 494 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NPIPA7E9PJI5 369 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NPIPA5E9PKD4 350 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 H0Y3Z8 333 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 FAAHO00519 579 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NME2P1O60361 137 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 ICOSLGO75144 302 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 OXSR1O95747 527 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 LDLRP01130 860 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 FABP3P05413 133 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NPIPA8P0DM63 369 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 IL7RP16871 459 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 ZNF26P17031 533 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 ITGA2P17301 1181 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 TNFRSF1BP20333 461 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 FUT4P22083 530 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NME2P22392 152 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 OR1E2P47887 323 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 TMED10P49755 219 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 HPCAP84074 193 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 PLGLB1Q02325 96 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 PLCXD2Q0VAA5 305 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 MRPL49Q13405 166 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 CD226Q15762 336 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 PDZK1Q5T2W1 519 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 MRPL2Q5T653 305 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 OGFRL1Q5TC84 451 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 OR2T5Q6IEZ7 315 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 HMGN2P46Q86SG4 172 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 AMIGO2Q86SJ2 522 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 ZNF227Q86WZ6 799 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 SULF2Q8IWU5 870 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 LSMEM1Q8N8F7 131 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 OR2T29Q8NH02 315 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 CNOT9Q92600 299 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 SPACA9Q96E40 222 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 ARSGQ96EG1 525 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 TAAR6Q96RI8 345 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NODALQ96S42 347 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 PIP5K1AQ99755 562 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 PSD2Q9BQI7 771 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 POLR2J2Q9GZM3 115 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 LAT2Q9GZY6 243 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 POLR2J3Q9H1A7 115 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 PROK2Q9HC23 129 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 SACM1LQ9NTJ5 587 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 VNN3Q9NY84 501 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 CNIH4Q9P003 139 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 CNOT11Q9UKZ1 510 aaKnown RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 A4GNTQ9UNA3 340 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NPIPA1Q9UND3 350 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 SLC35A3Q9Y2D2 325 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 SLC9A8Q9Y2E8 581 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 NTNG1Q9Y2I2 539 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 CHCHD2Q9Y6H1 151 aaPredicted RBP7.72□□□□□ -1.17
HERC4-203ENST00000395185 KALRNO60229 2985 aa7.72□□□□□ -1.17
HERC4-203ENST00000395185 COL6A6A6NMZ7 2263 aa7.71□□□□□ -1.17
HERC4-203ENST00000395185 A0A1W2PRQ8 180 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 B4DXG7 233 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 M0R3H8 397 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 ACOT7O00154 380 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.18
HERC4-203ENST00000395185 TFECO14948 347 aaPredicted RBP7.71□□□□□ -1.18
HERC4-203ENST00000395185 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 OIP5O43482 229 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 EIF4E2O60573 245 aaKnown RBP7.71□□□□□ -1.18
HERC4-203ENST00000395185 OR6B1O95007 311 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 BAG2O95816 211 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 MT-ND1P03886 318 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 THY1P04216 161 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 IFNW1P05000 195 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 PRG2P13727 222 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 ZNF24P17028 368 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 HTR2AP28223 471 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 SOX3P41225 446 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 PTDSS1P48651 473 aaKnown RBP7.71□□□□□ -1.18
HERC4-203ENST00000395185 ST13P50502 369 aaKnown RBP7.71□□□□□ -1.18
HERC4-203ENST00000395185 FBXW4P57775 412 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 PPIAP62937 165 aaKnown RBP7.71□□□□□ -1.18
HERC4-203ENST00000395185 SKP2Q13309 424 aa7.71□□□□□ -1.18
HERC4-203ENST00000395185 SNTA1Q13424 505 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms