RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DNAJA2O60884 412 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 PABPC4LP0CB38 370 aaKnown RBP17.97■□□□□ 0.47
SNCA-203ENST00000394986 PEPDP12955 493 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 GABRA1P14867 456 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 CPA2P48052 419 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 NUDT2P50583 147 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 SUCLG1P53597 346 aaKnown RBP17.97■□□□□ 0.47
SNCA-203ENST00000394986 CLDN15P56746 228 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 ZNF311Q5JNZ3 666 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 GKAP1Q5VSY0 366 aaPredicted RBP17.97■□□□□ 0.47
SNCA-203ENST00000394986 SERPINA11Q86U17 422 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 METTL25Q8N6Q8 603 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 HIPK4Q8NE63 616 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 TRIB1Q96RU8 372 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 TTYH2Q9BSA4 534 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 EXOSC3Q9NQT5 275 aaKnown RBP17.97■□□□□ 0.47
SNCA-203ENST00000394986 GMPR2Q9P2T1 348 aaKnown RBP17.97■□□□□ 0.47
SNCA-203ENST00000394986 ANGPT4Q9Y264 503 aa17.97■□□□□ 0.47
SNCA-203ENST00000394986 GPC6Q9Y625 555 aaPredicted RBP17.97■□□□□ 0.47
SNCA-203ENST00000394986 CDHR4A6H8M9 788 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 FRS3O43559 492 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 DCTN3O75935 186 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 THBS1P07996 1170 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 GKN3PP0CG01 181 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 GLI4P10075 376 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 ETS2P15036 469 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 PGCP20142 388 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 SESN3P58005 492 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 LARS2Q15031 903 aaKnown RBP17.96■□□□□ 0.47
SNCA-203ENST00000394986 RNF220Q5VTB9 566 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 MTFR2Q6P444 385 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 SEM1Q6ZVN7 128 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 COMTD1Q86VU5 262 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 CALHM3Q86XJ0 350 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 EID3Q8N140 333 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 PHF10Q8WUB8 498 aaKnown RBP17.96■□□□□ 0.47
SNCA-203ENST00000394986 ITLN2Q8WWU7 325 aaPredicted RBP17.96■□□□□ 0.47
SNCA-203ENST00000394986 CMTM5Q96DZ9 223 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 LRRC37BQ96QE4 947 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 SH3GL1Q99961 368 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 ECSITQ9BQ95 431 aa17.96■□□□□ 0.47
SNCA-203ENST00000394986 GPATCH1Q9BRR8 931 aaKnown RBP17.96■□□□□ 0.47
SNCA-203ENST00000394986 CACYBPQ9HB71 228 aaKnown RBP17.96■□□□□ 0.47
SNCA-203ENST00000394986 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 CCT8L1PA6NM43 557 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 AHRRA9YTQ3 701 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 EFNA2O43921 213 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 GCM2O75603 506 aaPredicted RBP17.95■□□□□ 0.46
SNCA-203ENST00000394986 NTN1O95631 604 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 SHC1P29353 583 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 PRDX6P30041 224 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 RBBP4Q09028 425 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 CDSNQ15517 529 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 BCL2A1Q16548 175 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 GLIPR1L2Q4G1C9 344 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 DOPEY1Q5JWR5 2465 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 POMZP3Q6PJE2 187 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 GGNQ86UU5 652 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 ANKS4BQ8N8V4 417 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 ZNF563Q8TA94 476 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 SPATA9Q9BWV2 254 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 EFCAB1Q9HAE3 211 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 ARL8BQ9NVJ2 186 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 CMTM6Q9NX76 183 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 IFT52Q9Y366 437 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 AP4B1Q9Y6B7 739 aa17.95■□□□□ 0.46
SNCA-203ENST00000394986 A1L4Q6 167 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 CLCA1A8K7I4 914 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 LINC01387J3KSC0 135 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 TPST1O60507 370 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 OPN1SWP03999 348 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 PRG2P13727 222 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 PTGER4P35408 488 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 EIF1P41567 113 aaKnown RBP17.94■□□□□ 0.46
SNCA-203ENST00000394986 IDH2P48735 452 aaKnown RBP17.94■□□□□ 0.46
SNCA-203ENST00000394986 PCBP3P57721 371 aaKnown RBP17.94■□□□□ 0.46
SNCA-203ENST00000394986 ART3Q13508 389 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 VMACQ2NL98 169 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 SLC25A53Q5H9E4 307 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 C8orf82Q6P1X6 216 aaPredicted RBP17.94■□□□□ 0.46
SNCA-203ENST00000394986 MRGPRGQ86SM5 289 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 KRT73Q86Y46 540 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 CCDC71Q8IV32 467 aaPredicted RBP17.94■□□□□ 0.46
SNCA-203ENST00000394986 MEIOBQ8N635 442 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 CCDC197Q8NCU1 140 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 ATP6V1C2Q8NEY4 427 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 ZPLD1Q8TCW7 415 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 MRGPRX4Q96LA9 322 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 ZNF583Q96ND8 569 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 ZNF232Q9UNY5 417 aa17.94■□□□□ 0.46
SNCA-203ENST00000394986 COL12A1Q99715 3063 aa17.93■□□□□ 0.46
SNCA-203ENST00000394986 CFAP73A6NFT4 308 aa17.93■□□□□ 0.46
SNCA-203ENST00000394986 ETV2O00321 342 aaPredicted RBP17.93■□□□□ 0.46
SNCA-203ENST00000394986 EIF1AYO14602 144 aaKnown RBP17.93■□□□□ 0.46
SNCA-203ENST00000394986 TOXO94900 526 aa17.93■□□□□ 0.46
SNCA-203ENST00000394986 EPPINO95925 133 aa17.93■□□□□ 0.46
SNCA-203ENST00000394986 HOXD4P09016 255 aaPredicted RBP17.93■□□□□ 0.46
SNCA-203ENST00000394986 PCGF2P35227 344 aa17.93■□□□□ 0.46
SNCA-203ENST00000394986 SFTPDP35247 375 aa17.93■□□□□ 0.46
SNCA-203ENST00000394986 SLC7A2P52569 658 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms