RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 DGAT2Q96PD7 388 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 TGM7Q96PF1 710 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 TBX5Q99593 518 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ZFYVE21Q9BQ24 234 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 MED18Q9BUE0 208 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 LGR4Q9BXB1 951 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 TEX101Q9BY14 249 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CLMPQ9H6B4 373 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 TMEM27Q9HBJ8 222 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 BTNL2Q9UIR0 455 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 MTCH2Q9Y6C9 303 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 MYO16Q9Y6X6 1858 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 IQCMA0A1B0GVH7 501 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 D6RAR5 112 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 DSCR3O14972 297 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 MBTPS2O43462 519 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 UBXN7O94888 489 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CBX7O95931 251 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 BCHEP06276 602 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 SPARCP09486 303 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PSMB5P28074 263 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PITPNBP48739 271 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CTBP2P56545 445 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 DLX2Q07687 328 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 TNK1Q13470 666 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ZNF273Q14593 569 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PEA15Q15121 130 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 TUSC1Q2TAM9 212 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 SLC22A10Q63ZE4 541 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PAPD4Q6PIY7 484 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 GSG1LQ6UXU4 331 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 C6orf120Q7Z4R8 191 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CLDN22Q8N7P3 220 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 ACOT12Q8WYK0 555 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 OR1E3Q8WZA6 343 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 KIAA1143Q96AT1 154 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 EGLN2Q96KS0 407 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 INPP5KQ9BT40 448 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 POT1Q9NUX5 634 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 KIF25Q9UIL4 384 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 GTF2A1LQ9UNN4 478 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 LIPT1Q9Y234 373 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PLEKHM1Q9Y4G2 1056 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ZNF638Q14966 1978 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 SCN5AQ14524 2016 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 POM121BA6NF01 834 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 OTOL1A6NHN0 477 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 GABRR3A8MPY1 467 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 DUX1O43812 170 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 B4GALT2O60909 372 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 GPX5O75715 221 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 GRK5P34947 590 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 IGFALSP35858 605 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CCR5P51681 352 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 CLDN20P56880 219 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 BTG1P62324 171 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PDZK1IP1Q13113 114 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 LASP1Q14847 261 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 CDKN3Q16667 212 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 XKR7Q5GH72 579 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PRAMEF17Q5VTA0 474 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 MEDAGQ5VYS4 303 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 METAP1DQ6UB28 335 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 FAM122BQ7Z309 247 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 GPR155Q7Z3F1 870 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ZNF761Q86XN6 746 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 DEFB123Q8N688 67 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 NLGN4YQ8NFZ3 816 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 OR2L5Q8NG80 312 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 OR13H1Q8NG92 308 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 OR8D4Q8NGM9 314 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 OR8J1Q8NGP2 316 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 OR52P1PQ8NH57 321 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 SCARB1Q8WTV0 552 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 GEMIN6Q8WXD5 167 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 CNOT9Q92600 299 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 MRPL48Q96GC5 212 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 CNTNAP3BQ96NU0 1288 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 DPH2Q9BQC3 489 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 SLC19A3Q9BZV2 496 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 FN3KQ9H479 309 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 C6orf106Q9H6K1 298 aaPredicted RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 FGF22Q9HCT0 170 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 MYNNQ9NPC7 610 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 ASB1Q9Y576 335 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 PCDHGA9Q9Y5G4 932 aaKnown RBP5.32□□□□□ -1.56
RFFL-202ENST00000394597 DNAJC13O75165 2243 aa5.32□□□□□ -1.56
RFFL-202ENST00000394597 TMEM265A0A087WTH1 108 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 A0A0A6YYJ9 748 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 A0A0G2JMP0 313 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 A0A0J9YY10 115 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 C2orf92A0A1B0GVN3 265 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ZNF860A6NHJ4 632 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RNASET2O00584 256 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 EMC8O43402 210 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TCRBP04435 133 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PPP3CBP16298 524 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 BMP7P18075 431 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TEAD1P28347 426 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms