RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CCSMST1Q4G0I0 132 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 AVPI1Q5T686 147 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 LDLRAD3Q86YD5 345 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 EID2Q8N6I1 236 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 GPR32P1Q8NGA4 272 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 OR10K1Q8NGX5 313 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 LRIG1Q96JA1 1093 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 CMTM3Q96MX0 182 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 TINAGL1Q9GZM7 467 aaPredicted RBP17.56■□□□□ 0.4
HOXC6-202ENST00000394331 TAS2R3Q9NYW6 316 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 ABRACLQ9P1F3 81 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 DPP7Q9UHL4 492 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 OPN4Q9UHM6 478 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 PCOLCE2Q9UKZ9 415 aa17.56■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF749O43361 778 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 HEXAP06865 529 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 MMP11P24347 488 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 SLC6A11P48066 632 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 TMEM115Q12893 351 aaPredicted RBP17.55■□□□□ 0.4
HOXC6-202ENST00000394331 FZD5Q13467 585 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 SLC5A12Q1EHB4 618 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF385BQ569K4 471 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF805Q5CZA5 627 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 REEP4Q9H6H4 257 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 PRDM9Q9NQV7 894 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 TDP1Q9NUW8 608 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 DENND4CQ5VZ89 1909 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 A0A1B0GVC2 190 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 A6NIN4 97 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 WRBO00258 174 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 ST8SIA5O15466 376 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 GPR37L1O60883 481 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 FGF19O95750 216 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 C6orf47O95873 294 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 SPP1P10451 314 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 RPL3P39023 403 aaKnown RBP17.55■□□□□ 0.4
HOXC6-202ENST00000394331 GDNFP39905 211 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 AP3S2P59780 193 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 HES5Q5TA89 166 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 ADNP2Q6IQ32 1131 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 SPAG16Q8N0X2 631 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 SORCS1Q8WY21 1168 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 THAP4Q8WY91 577 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 TCEAL7Q9BRU2 100 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 RNF208Q9H0X6 261 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 IL36AQ9UHA7 158 aa17.55■□□□□ 0.4
HOXC6-202ENST00000394331 RAB19A4D1S5 217 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 CHURC1-FNTBB4DL54 471 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 DISC1C4P0D8 188 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 NPC1O15118 1278 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 EPHX1P07099 455 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 SYN1P17600 705 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 CASP9P55211 416 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 CDH11P55287 796 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 DLX5P56178 289 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 PDE7AQ13946 482 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 LY6G5CQ5SRR4 150 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 TMEM215Q68D42 235 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 TSNAXQ99598 290 aaKnown RBP17.54■□□□□ 0.4
HOXC6-202ENST00000394331 HRASLSQ9HDD0 168 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 A4GALTQ9NPC4 353 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 CTPS2Q9NRF8 586 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 HCFC1R1Q9NWW0 138 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 FLVCR2Q9UPI3 526 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 MAP4K5Q9Y4K4 846 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 ANKRD61A6NGH8 418 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 STAT5AP42229 794 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 RPS13P62277 151 aaKnown RBP17.54■□□□□ 0.4
HOXC6-202ENST00000394331 TMEM220Q6QAJ8 160 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 PUSL1Q8N0Z8 303 aaKnown RBP17.54■□□□□ 0.4
HOXC6-202ENST00000394331 TEX19Q8NA77 164 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 GPR156Q8NFN8 814 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 THEM6Q8WUY1 208 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 MYLIPQ8WY64 445 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 MRGPRX3Q96LB0 322 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF354BQ96LW1 612 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 LINC00597Q9H2U6 94 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 NKIRAS2Q9NYR9 191 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 DVL2O14641 736 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 SH3BGRLO75368 114 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 HTR3BO95264 441 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 IGHV2-70P01814 119 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 CCR8P51685 355 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 GMFBP60983 142 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 SIM1P81133 766 aaPredicted RBP17.54■□□□□ 0.4
HOXC6-202ENST00000394331 TEAD2Q15562 447 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 C10orf91Q5T1B1 145 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 PRAMEF13Q5VWM6 474 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 PODNL1Q6PEZ8 512 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 NRSN1Q8IZ57 195 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 LILRA3Q8N6C8 439 aaPredicted RBP17.54■□□□□ 0.4
HOXC6-202ENST00000394331 CYB5D2Q8WUJ1 264 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 NEIL2Q969S2 332 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 BBS4Q96RK4 519 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 IER2Q9BTL4 223 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 EPHX3Q9H6B9 360 aa17.54■□□□□ 0.4
HOXC6-202ENST00000394331 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
HOXC6-202ENST00000394331 UBXN7O94888 489 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ELFN1P0C7U0 828 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms