RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CRHBPP24387 322 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 CASP3P42574 277 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 LEG1Q6P5S2 330 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 PSMF1Q92530 271 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 TLE6Q9H808 572 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 EMC8O43402 210 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 HCCSP53701 268 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 FAM180BQ6P0A1 224 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 SLC51BQ86UW2 128 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 SLC17A6Q9P2U8 582 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 A0A0G2JLW4 131 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ANKRD30BLA7E2S9 258 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 GLB1P16278 677 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 UBE2G1P62253 170 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 CXADRP78310 365 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 CAP1Q01518 475 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ZNF239Q16600 458 aaKnown RBP12.68□□□□□ -0.38
USP49-203ENST00000394253 ZNF648Q5T619 568 aaPredicted RBP12.68□□□□□ -0.38
USP49-203ENST00000394253 MFSD6LQ8IWD5 586 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ANKRD19PQ9H560 264 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 FKRPQ9H9S5 495 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ABCA4P78363 2273 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 MMP3P08254 477 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 NTF3P20783 257 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 GABRR1P24046 479 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ITGB8P26012 769 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 PDZK1IP1Q13113 114 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 SLC38A6Q8IZM9 456 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 CMASQ8NFW8 434 aaPredicted RBP12.68□□□□□ -0.38
USP49-203ENST00000394253 MSLNLQ96KJ4 702 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 FCRL5Q96RD9 977 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 EDDM13A0A1B0GTR0 161 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 SLC11A1P49279 550 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ADAMTS18Q8TE60 1221 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 PRAP1Q96NZ9 151 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ARHGAP9Q9BRR9 750 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 HCAR1Q9BXC0 346 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 POPDC3Q9HBV1 291 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 BMP4P12644 408 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 RAB1AP62820 205 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 ALKAL2Q6UX46 152 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 PPP1R3BQ86XI6 285 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 OR9I1Q8NGQ6 314 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 APH1AQ96BI3 265 aa12.68□□□□□ -0.38
USP49-203ENST00000394253 GSRP00390 522 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 S100A11P31949 105 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 JAM2P57087 298 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 H3F3CQ6NXT2 135 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 LALBAP00709 142 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ALDOAP04075 364 aaKnown RBP12.67□□□□□ -0.38
USP49-203ENST00000394253 STEAP1BQ6NZ63 245 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 SLC35F2Q8IXU6 374 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ZNF34Q8IZ26 560 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 OR14L1PQ8NHC6 308 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 USP36Q9P275 1121 aaKnown RBP12.67□□□□□ -0.38
USP49-203ENST00000394253 TGFBR3Q03167 851 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PLBD1Q6P4A8 553 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TRIB3Q96RU7 358 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ZNF160Q9HCG1 818 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PCDHA9Q9Y5H5 950 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TRAV20A0A0B4J274 112 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TEKQ02763 1124 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 RAB40BQ12829 278 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 HYAL2Q12891 473 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PLPP4Q5VZY2 271 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TSTD1Q8NFU3 115 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 OR52P1PQ8NH57 321 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 KPTNQ9Y664 436 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 B4DGG1 531 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 LAG3P18627 525 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PLCXD2Q0VAA5 305 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 IGFN1Q86VF2 1251 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ADAMTS14Q8WXS8 1223 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 SLC2A6Q9UGQ3 507 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PCDHB10Q9UN67 800 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 SMIM35A0A1B0GVV1 85 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 FAM159BA6NKW6 160 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 CCL22O00626 93 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 CCL16O15467 120 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 OR8U8P0C7N1 319 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 SLC7A9P82251 487 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PCLAFQ15004 111 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 GLYR1Q49A26 553 aaPredicted RBP12.67□□□□□ -0.38
USP49-203ENST00000394253 SIRPB2Q5JXA9 342 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 PLEKHS1Q5SXH7 462 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TECPR1Q7Z6L1 1165 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 SLC2A9Q9NRM0 540 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 CLDN1O95832 211 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ACP5P13686 325 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 OMGP23515 440 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 GCH1P30793 250 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TNFSF9P41273 254 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 ETV4P43268 484 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 MEOX1P50221 254 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms