RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 VRK2Q86Y07 508 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 NFKBIDQ8NI38 313 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 BBS10Q8TAM1 723 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 CNOT9Q92600 299 aaKnown RBP18.69■□□□□ 0.58
CDCA4-202ENST00000392590 ZNF524Q96C55 264 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 MRGPRX4Q96LA9 322 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 TRIM8Q9BZR9 551 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 TMEM38AQ9H6F2 299 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 EXOSC3Q9NQT5 275 aaKnown RBP18.69■□□□□ 0.58
CDCA4-202ENST00000392590 DOPEY1Q5JWR5 2465 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 HSPB2A8KAH6 182 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 MRASO14807 208 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 GP1BBP13224 206 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 RYKP34925 604 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 SLC6A8P48029 635 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 LARS2Q15031 903 aaKnown RBP18.69■□□□□ 0.58
CDCA4-202ENST00000392590 HSPB2Q16082 182 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 LIN52Q52LA3 116 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 MRPL2Q5T653 305 aaKnown RBP18.69■□□□□ 0.58
CDCA4-202ENST00000392590 REP15Q6BDI9 236 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 ADGRE4PQ86SQ3 457 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 PCYOX1LQ8NBM8 494 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 LILRB4Q8NHJ6 448 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 ZNF563Q8TA94 476 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 TMEM234Q8WY98 164 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 LRRC58Q96CX6 371 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 UCN2Q96RP3 112 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 IFT52Q9Y366 437 aa18.69■□□□□ 0.58
CDCA4-202ENST00000392590 KLF2Q9Y5W3 355 aaPredicted RBP18.69■□□□□ 0.58
CDCA4-202ENST00000392590 DOPEY2Q9Y3R5 2298 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 MBD3L4A6NDZ8 208 aaPredicted RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 MBD3L3A6NE82 208 aaPredicted RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 MBD3L5A6NJ08 208 aaPredicted RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 PRSS44E7EML9 344 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 NPPAP01160 153 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 OPN1LWP04000 364 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 IL11P20809 199 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 SLC6A2P23975 617 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 CEACAM8P31997 349 aaPredicted RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 RPS3AP61247 264 aaKnown RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 PLAURQ03405 335 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 SELPLGQ14242 412 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 ADRM1Q16186 407 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 SLC25A53Q5H9E4 307 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 NANOGP8Q6NSW7 305 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 REEP3Q6NUK4 255 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 GGNQ86UU5 652 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 LILRA2Q8N149 483 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 MBD3L2Q8NHZ7 208 aaPredicted RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 RP9Q8TA86 221 aaKnown RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 ST8SIA1Q92185 356 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 WNT2BQ93097 391 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 SH3GL1Q99961 368 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 TMEM185BQ9H7F4 350 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 NANOGQ9H9S0 305 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 RLIMQ9NVW2 624 aa18.68■□□□□ 0.58
CDCA4-202ENST00000392590 DNAJB12Q9NXW2 375 aaKnown RBP18.68■□□□□ 0.58
CDCA4-202ENST00000392590 ETV2O00321 342 aaPredicted RBP18.67■□□□□ 0.58
CDCA4-202ENST00000392590 EIF1AYO14602 144 aaKnown RBP18.67■□□□□ 0.58
CDCA4-202ENST00000392590 NTN1O95631 604 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 THBS1P07996 1170 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 ELK4P28324 431 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 HTR1EP28566 365 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 SESN3P58005 492 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 SCARB2Q14108 478 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 CYP51A1Q16850 503 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 ZSWIM7Q19AV6 140 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 ZNF311Q5JNZ3 666 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 PLXDC2Q6UX71 529 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 GRAMD2AQ8IUY3 354 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 C9orf106Q8NAJ2 232 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 TM9SF2Q99805 663 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 SLC39A3Q9BRY0 314 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 CCDC106Q9BWC9 280 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 ARMC7Q9H6L4 198 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 KAT8Q9H7Z6 458 aaKnown RBP18.67■□□□□ 0.58
CDCA4-202ENST00000392590 GID8Q9NWU2 228 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 CLCF1Q9UBD9 225 aa18.67■□□□□ 0.58
CDCA4-202ENST00000392590 ZNF443Q9Y2A4 671 aaPredicted RBP18.67■□□□□ 0.58
CDCA4-202ENST00000392590 MED12Q93074 2177 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 USP9YO00507 2555 aaPredicted RBP18.66■□□□□ 0.58
CDCA4-202ENST00000392590 CDHR4A6H8M9 788 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 EFNA2O43921 213 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 ETS2P15036 469 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 EEF1A1P68104 462 aaKnown RBP18.66■□□□□ 0.58
CDCA4-202ENST00000392590 SGCBQ16585 318 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 ZNF836Q6ZNA1 936 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 ESPNLQ6ZVH7 1005 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 KRT73Q86Y46 540 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 POU5F2Q8N7G0 328 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 NAXEQ8NCW5 288 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 SPATA9Q9BWV2 254 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 PINK1Q9BXM7 581 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 UCK2Q9BZX2 261 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 ACER3Q9NUN7 267 aa18.66■□□□□ 0.58
CDCA4-202ENST00000392590 CFAP73A6NFT4 308 aa18.65■□□□□ 0.58
CDCA4-202ENST00000392590 GJE1A6NN92 205 aa18.65■□□□□ 0.58
CDCA4-202ENST00000392590 FAM90A27PA6NNH2 459 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms