RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 LOC102723996A0A087X1L8 192 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 H3BN98 237 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF701M0R085 212 aaPredicted RBP11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 GTPBP1O00178 669 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 GNB5O14775 395 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 FMO6PO60774 539 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 TNFSF15O95150 251 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 FMO3P31513 532 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 CRISP1P54107 249 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 FBXW4P57775 412 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 TUBA4AP68366 448 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 ALDH6A1Q02252 535 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 CDK5R2Q13319 367 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 NEDD8Q15843 81 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 SMN1Q16637 294 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 CMIPQ8IY22 773 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 ENTHD1Q8IYW4 607 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 PARP8Q8N3A8 854 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 TMCO5AQ8N6Q1 288 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 PFN4Q8NHR9 129 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 WDR36Q8NI36 951 aaKnown RBP11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF524Q96C55 264 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 HOXD1Q9GZZ0 328 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 DSN1Q9H410 356 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 ANKRD19PQ9H560 264 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 C20orf141Q9NUB4 165 aa11.18□□□□□ -0.62
SPTBN1-203ENST00000389980 A0A0B4J2E0 115 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 A0A1B0GX12 115 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 SCO2O43819 266 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 UBL4AP11441 157 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 OSMP13725 252 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 FUT1P19526 365 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 PCSK6P29122 969 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 OTX2P32243 289 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 GGT2P36268 569 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 OMPP47874 163 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 PNLIPRP2P54317 469 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 NRG3P56975 720 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 PMS2P3Q13401 168 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 IL18R1Q13478 541 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 C6orf141Q5SZD1 244 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TMEM164Q5U3C3 297 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 KCTD8Q6ZWB6 473 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF550Q7Z398 422 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 KIF18BQ86Y91 864 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 POGLUT1Q8NBL1 392 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 OR11G2Q8NGC1 345 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 NUBPLQ8TB37 319 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 PIGXQ8TBF5 258 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TP53INP1Q96A56 240 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 APOL4Q9BPW4 351 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 EGLN3Q9H6Z9 239 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TMEM165Q9HC07 324 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TCFL5Q9UL49 500 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 RNF6Q9Y252 685 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 SLC35A3Q9Y2D2 325 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 SOCS6O14544 535 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 XPNPEP2O43895 674 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 OR2J2O76002 312 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ZFAND5O76080 213 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 NADKO95544 446 aaPredicted RBP11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 CYC1P08574 325 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF12P17014 697 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 F8A1P23610 371 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ESRRGP62508 458 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 SKP2Q13309 424 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 EIF3IQ13347 325 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 MAD2L1BPQ15013 274 aaPredicted RBP11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ALG10BQ5I7T1 473 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF613Q6PF04 617 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 MBOAT2Q6ZWT7 520 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 GPR141Q7Z602 305 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 LINC00471Q8N535 108 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 IQCF1Q8N6M8 205 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 SETD9Q8NE22 299 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 FAM71CQ8NEG0 241 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 BPIFB6Q8NFQ5 453 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ELP5Q8TE02 316 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TMEM239Q8WW34 195 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 DEFB126Q9BYW3 111 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 PLA2G12AQ9BZM1 189 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TRIM2Q9C040 744 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF700Q9H0M5 742 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 POLR1BQ9H9Y6 1135 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 PCDHGA3Q9Y5H0 932 aa11.17□□□□□ -0.62
SPTBN1-203ENST00000389980 TRIM64A6NGJ6 449 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 ZAR1LA6NP61 321 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 CDC42EP2O14613 210 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF264O43296 627 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 HCRTR2O43614 444 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 PPM1BO75688 479 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF24P17028 368 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 EVI2BP34910 448 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 ADH7P40394 386 aa11.16□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF117Q03924 483 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms