RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 RNF32Q9H0A6 362 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 C11orf54Q9H0W9 315 aaPredicted RBP13.82□□□□□ -0.2
SCFD2-201ENST00000388940 MED20Q9H944 212 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 HAO2Q9NYQ3 351 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 ZNF221Q9UK13 617 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 POMT2Q9UKY4 750 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 CDH23Q9H251 3354 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 DAPL1A0PJW8 107 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 MEIOCA2RUB1 952 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 HMX3A6NHT5 357 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 PLA2G10O15496 165 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 HPGDSO60760 199 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 IGLV3-19P01714 112 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 SLC2A5P22732 501 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 DDOSTP39656 456 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 ACAA2P42765 397 aaKnown RBP13.82□□□□□ -0.2
SCFD2-201ENST00000388940 CAPZA2P47755 286 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 TRAM1Q15629 374 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.82□□□□□ -0.2
SCFD2-201ENST00000388940 C6orf183Q5T699 404 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 LCN1P1Q5VSP4 162 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 DGAT2L6Q6ZPD8 337 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 LSMEM1Q8N8F7 131 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 NACC2Q96BF6 587 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 ZNF486Q96H40 463 aaPredicted RBP13.82□□□□□ -0.2
SCFD2-201ENST00000388940 NEK6Q9HC98 313 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 TRIM36Q9NQ86 728 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 GPR27Q9NS67 375 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 FLRT3Q9NZU0 649 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
SCFD2-201ENST00000388940 SPTY2D1-AS1A0A0U1RR47 76 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 C2orf92A0A1B0GVN3 265 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 A0A1B0GWA3 101 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 CD8B2A6NJW9 211 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 SLC19A2O60779 497 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 RDH16O75452 317 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 RFPL3O75679 317 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 SAGP10523 405 aaPredicted RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 CD8BP10966 210 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 F8A1P23610 371 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 ZNHIT3Q15649 155 aaPredicted RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 KIAA0895LQ68EN5 471 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 LINC00114Q6XXX2 140 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 B3GLCTQ6Y288 498 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 RTL4Q6ZR62 310 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 SFTPA2Q8IWL1 248 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 GPALPP1Q8IXQ4 340 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 ZC3HAV1LQ96H79 300 aaKnown RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 SENP5Q96HI0 755 aaPredicted RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 FOLH1BQ9HBA9 442 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 STARD5Q9NSY2 213 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 DNAJB12Q9NXW2 375 aaKnown RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 NDRG2Q9UN36 371 aaKnown RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 SIRT4Q9Y6E7 314 aaPredicted RBP13.81□□□□□ -0.2
SCFD2-201ENST00000388940 REV3LO60673 3130 aa13.81□□□□□ -0.2
SCFD2-201ENST00000388940 BLACEA4D250 179 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 RIIAD1A6NNX1 92 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 B4DXG7 233 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 HCRTR1O43613 425 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 PLPP2O43688 288 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 OR10H2O60403 315 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 MT-ND5P03915 603 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 CELA2BP08218 269 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 HK1P19367 917 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 APEX1P27695 318 aaKnown RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 EMDP50402 254 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 PPP1CAP62136 330 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ZNF141Q15928 474 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 PRTGQ2VWP7 1150 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ARMC6Q6NXE6 501 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 OR9A4Q8NGU2 314 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 OR5W2Q8NH69 310 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 OR4C6Q8NH72 309 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 NECTIN4Q96NY8 510 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 FAM60AQ9NP50 221 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 CD207Q9UJ71 328 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ZC3H12DA2A288 527 aaKnown RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 SBK2P0C263 348 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 SLC2A2P11168 524 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 PEPDP12955 493 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ST6GAL1P15907 406 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 TAS2R43P59537 309 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 IGLV3-21P80748 117 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 HHEXQ03014 270 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 FZD2Q14332 565 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 INSL4Q14641 139 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 KLHL12Q53G59 568 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ATAD3CQ5T2N8 411 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 HMGB4Q8WW32 186 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 ST6GAL2Q96JF0 529 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 LRFN5Q96NI6 719 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 UBL7Q96S82 380 aaPredicted RBP13.8□□□□□ -0.2
SCFD2-201ENST00000388940 NDC1Q9BTX1 674 aa13.8□□□□□ -0.2
SCFD2-201ENST00000388940 LINC00854A0A1B0GVQ3 168 aa13.79□□□□□ -0.2
SCFD2-201ENST00000388940 TNFRSF10AO00220 468 aa13.79□□□□□ -0.2
SCFD2-201ENST00000388940 NCR1O76036 304 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms