RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 CCDC115Q96NT0 180 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 WFIKKN1Q96NZ8 548 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 ZBTB18Q99592 522 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 FOXC2Q99958 501 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 KLHL4Q9C0H6 718 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 TMBIM4Q9HC24 238 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 C6orf203Q9P0P8 240 aaPredicted RBP16.3■□□□□ 0.2
CD9-204ENST00000382519 KCNE5Q9UJ90 142 aa16.3■□□□□ 0.2
CD9-204ENST00000382519 KIAA0513O60268 411 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 UGT2B17O75795 530 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 RAF1P04049 648 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 UBTFL6P0CB48 400 aaPredicted RBP16.29■□□□□ 0.2
CD9-204ENST00000382519 PCYT1AP49585 367 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 SKP2Q13309 424 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 KEAP1Q14145 624 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 TMEM176BQ3YBM2 270 aaPredicted RBP16.29■□□□□ 0.2
CD9-204ENST00000382519 HEPHL1Q6MZM0 1159 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 ZNF550Q7Z398 422 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 RAB3IL1Q8TBN0 382 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 ROBO4Q8WZ75 1007 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 ROPN1LQ96C74 230 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 TLCD1Q96CP7 247 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 NEURL3Q96EH8 262 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 ZC3HAV1LQ96H79 300 aaKnown RBP16.29■□□□□ 0.2
CD9-204ENST00000382519 PANX1Q96RD7 426 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 SRXN1Q9BYN0 137 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 C12orf49Q9H741 205 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 MANSC1Q9H8J5 431 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 TIGARQ9NQ88 270 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 GLRX2Q9NS18 164 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 ZNF226Q9NYT6 803 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 BTNL2Q9UIR0 455 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 WDR45Q9Y484 360 aa16.29■□□□□ 0.2
CD9-204ENST00000382519 SLCO1B7G3V0H7 640 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 EFNA2O43921 213 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 PABPC4LP0CB38 370 aaKnown RBP16.28■□□□□ 0.2
CD9-204ENST00000382519 IL12AP29459 219 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 SLC7A1P30825 629 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 SLC18A1P54219 525 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 SELENBP1Q13228 472 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 GPAT3Q53EU6 434 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 GTF2IRD2BQ6EKJ0 949 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 TYW3Q6IPR3 259 aaKnown RBP16.28■□□□□ 0.2
CD9-204ENST00000382519 EIF3MQ7L2H7 374 aaKnown RBP16.28■□□□□ 0.2
CD9-204ENST00000382519 GTF2IRD2Q86UP8 949 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 RNF130Q86XS8 419 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 TRIML2Q8N7C3 387 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 ZFP90Q8TF47 636 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 CPNE4Q96A23 557 aaPredicted RBP16.28■□□□□ 0.2
CD9-204ENST00000382519 MARK4Q96L34 752 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 OR52E6Q96RD3 313 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 THUMPD3Q9BV44 507 aaKnown RBP16.28■□□□□ 0.2
CD9-204ENST00000382519 LAT2Q9GZY6 243 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 PLEKHF2Q9H8W4 249 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 POLE3Q9NRF9 147 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 GPR45Q9Y5Y3 372 aa16.28■□□□□ 0.2
CD9-204ENST00000382519 PRRC2AP48634 2157 aaKnown RBP16.27■□□□□ 0.2
CD9-204ENST00000382519 A0A1W2PPR1 153 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 CCDC154A6NI56 674 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ATE1O95260 518 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 PGRP06401 933 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 AGTR1P30556 359 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 FUT5Q11128 374 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ANKRD34AQ69YU3 496 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 FRRS1Q6ZNA5 592 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 HMGN2P46Q86SG4 172 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 STK32CQ86UX6 486 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ZNF619Q8N2I2 560 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 RNF128Q8TEB7 428 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ABHD3Q8WU67 409 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ARL8AQ96BM9 186 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ZNF524Q96C55 264 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 PIK3IP1Q96FE7 263 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 INPP5KQ9BT40 448 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 QRSL1Q9H0R6 528 aaKnown RBP16.27■□□□□ 0.2
CD9-204ENST00000382519 CXXC4Q9H2H0 198 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 COQ10BQ9H8M1 238 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 PLSCR4Q9NRQ2 329 aa16.27■□□□□ 0.2
CD9-204ENST00000382519 ITPR3Q14573 2671 aa16.27■□□□□ 0.19
CD9-204ENST00000382519 A0A1W2PNR3 127 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 NTN1O95631 604 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 C1QCP02747 245 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 GSNP06396 782 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 IDO1P14902 403 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 PGCP20142 388 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 CRYGSP22914 178 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 CDKN2CP42773 168 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 ANXA11P50995 505 aaKnown RBP16.26■□□□□ 0.19
CD9-204ENST00000382519 RNPS1Q15287 305 aaKnown RBP16.26■□□□□ 0.19
CD9-204ENST00000382519 MAPK14Q16539 360 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 TIGD2Q4W5G0 525 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 SLC9B1Q4ZJI4 515 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 SLC25A53Q5H9E4 307 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 TMEM201Q5SNT2 666 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 C3orf33Q6P1S2 294 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
CD9-204ENST00000382519 ZNF621Q6ZSS3 439 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 FCRLAQ7L513 359 aa16.26■□□□□ 0.19
CD9-204ENST00000382519 PNPT1Q8TCS8 783 aaKnown RBP16.26■□□□□ 0.19
CD9-204ENST00000382519 ST8SIA1Q92185 356 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms