RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 FABP5Q01469 135 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 NNATQ16517 81 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 PRTGQ2VWP7 1150 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ZCCHC12Q6PEW1 402 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 OR13C2Q8NGS9 318 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ASB15Q8WXK1 588 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TTYH1Q9H313 450 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 FOLH1BQ9HBA9 442 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 KLHL3Q9UH77 587 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CA14Q9ULX7 337 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SPAG17Q6Q759 2223 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TRAV27A0A087WT01 109 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SAGE2PA6NJ88 616 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SNTNA6NMZ2 147 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SSX4O60224 188 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 NGFRP08138 427 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 MAOAP21397 527 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 DRD5P21918 477 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SDC2P34741 201 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 RORCP51449 518 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CAV3P56539 151 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TPBGQ13641 420 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 PLK5Q496M5 336 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SPANXN2Q5MJ10 180 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 NXNL2Q5VZ03 156 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 NPSR1Q6W5P4 371 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 NCCRP1Q6ZVX7 275 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 CXXC5Q7LFL8 322 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 MINDY2Q8NBR6 621 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TOR1AIP2Q8NFQ8 470 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 TSTD1Q8NFU3 115 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 OR51G2Q8NGK0 314 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 FANK1Q8TC84 345 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 HOXB13Q92826 284 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 RIT1Q92963 219 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 BPIFA2Q96DR5 249 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 HS6ST2Q96MM7 605 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SECISBP2Q96T21 854 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 USB1Q9BQ65 265 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 SLC30A2Q9BRI3 323 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 PRRG3Q9BZD7 231 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 LMAN1LQ9HAT1 526 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 MUTYHQ9UIF7 546 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 EXOSC1Q9Y3B2 195 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 UGT2A1Q9Y4X1 527 aa7.36□□□□□ -1.23
PDLIM5-204ENST00000380176 WDFY3Q8IZQ1 3526 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CEP192Q8TEP8 1941 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 ISPDA4D126 451 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 DVL2O14641 736 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 MBTPS2O43462 519 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 HRO43593 1189 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 HTR1FP30939 366 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 BLKP51451 505 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 GFERP55789 205 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 STX4Q12846 297 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 HNRNPA0Q13151 305 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CARTPTQ16568 116 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 TMEM95Q3KNT9 176 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 AGAP7PQ5VUJ5 663 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 OR51A7Q8NH64 312 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 BRIX1Q8TDN6 353 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 LMX1AQ8TE12 382 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 RFKQ969G6 155 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 SLC25A46Q96AG3 418 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CD180Q99467 661 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 ISG20L2Q9H9L3 353 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 SACM1LQ9NTJ5 587 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 PLEKHB1Q9UF11 243 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 SIGLEC7Q9Y286 467 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 EXOGQ9Y2C4 368 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 V9GYH0 126 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 DMDP11532 3685 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 A0A1B0GWA3 101 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 LOC110117498-PIK3R3F6TDL0 507 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 IGHA1P01876 353 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CLUP10909 449 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 ACAA2P42765 397 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 PSPHP78330 225 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 MADCAM1Q13477 382 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF267Q14586 743 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF79Q15937 498 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 NDUFAF6Q330K2 333 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 TM4SF20Q53R12 229 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 TMEM151BQ8IW70 566 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 RNF113BQ8IZP6 322 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CLDN22Q8N7P3 220 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 RCBTB1Q8NDN9 531 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 SMAP2Q8WU79 429 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 SPRYD4Q8WW59 207 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 PTP4A1Q93096 173 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 RBM18Q96H35 190 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 CEP19Q96LK0 163 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 VSTM2LQ96N03 204 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 TBX5Q99593 518 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 TIMP4Q99727 224 aa7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 LMF2Q9BU23 707 aaKnown RBP7.35□□□□□ -1.23
PDLIM5-204ENST00000380176 TMED9Q9BVK6 235 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms