RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PNPT1Q8TCS8 783 aaKnown RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 ZFP90Q8TF47 636 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 GTF2H4Q92759 462 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 SPDL1Q96EA4 605 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 NPAS1Q99742 590 aa16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 SETD2Q9BYW2 2564 aaPredicted RBP16.97■□□□□ 0.31
TMEM88B-201ENST00000378821 C2CD3Q4AC94 2353 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 PRAMEF27A3QJZ7 478 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 SEC14L5O43304 696 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 GMFGO60234 142 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 AQP8O94778 261 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 ZCCHC18P0CG32 403 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 TROVE2P10155 538 aaKnown RBP eCLIP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 FCGR2AP12318 317 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 HPGDP15428 266 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 NCF2P19878 526 aaPredicted RBP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 IL11P20809 199 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 RAC1P63000 192 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 IRX1P78414 480 aaPredicted RBP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 SF3A3Q12874 501 aaKnown RBP eCLIP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 KLHL26Q53HC5 615 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 COX20Q5RI15 118 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 MTERF4Q7Z6M4 381 aaKnown RBP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 CNEP1R1Q8N9A8 125 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 XAGE5Q8WWM1 108 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 WFIKKN1Q96NZ8 548 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 ZNF350Q9GZX5 532 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 PAIP1Q9H074 479 aaKnown RBP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 SLC52A3Q9NQ40 469 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 PLSCR4Q9NRQ2 329 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 MED17Q9NVC6 651 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 EXD2Q9NVH0 621 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 PAQR5Q9NXK6 330 aaPredicted RBP16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 VDAC3Q9Y277 283 aa16.96■□□□□ 0.31
TMEM88B-201ENST00000378821 MTORP42345 2549 aa16.96■□□□□ 0.3
TMEM88B-201ENST00000378821 CENPVL1A0A0U1RR11 272 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 SHISA8B8ZZ34 492 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 HMGN4O00479 90 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 FCMRO60667 390 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 SMNDC1O75940 238 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 ANP32DO95626 131 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 AGR2O95994 175 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 LINGO3P0C6S8 592 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 CD99P14209 185 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 NID1P14543 1247 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 HOXB9P17482 250 aaPredicted RBP16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 CCKARP32238 428 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 UGT2B10P36537 528 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 MVDP53602 400 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 ATP12AP54707 1039 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 ATAD3BQ5T9A4 648 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 FAM214BQ7L5A3 538 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 POC1BQ8TC44 478 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 ROPN1LQ96C74 230 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 AURKBQ96GD4 344 aaPredicted RBP16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 KLHDC3Q9BQ90 382 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 SLC39A3Q9BRY0 314 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 HOXD1Q9GZZ0 328 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 OPN3Q9H1Y3 402 aaPredicted RBP16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 DLL4Q9NR61 685 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 TMEM45AQ9NWC5 275 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 TRIM33Q9UPN9 1127 aa16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF469Q96JG9 3925 aaPredicted RBP16.95■□□□□ 0.3
TMEM88B-201ENST00000378821 DEFB108AA8MXU0 73 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 CASKO14936 926 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 SIAH2O43255 324 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 OIP5O43482 229 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 STX11O75558 287 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 KRT75O95678 551 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 KLK2P20151 261 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 CPOXP36551 454 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 SLC6A8P48029 635 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 GPR68Q15743 365 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 DEFB113Q30KQ7 82 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 FBXW10Q5XX13 1052 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 ESPNLQ6ZVH7 1005 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF614Q8N883 585 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF527Q8NB42 609 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 B4GALNT2Q8NHY0 566 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 SH3YL1Q96HL8 342 aaPredicted RBP16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF317Q96PQ6 595 aaPredicted RBP16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 NMUR2Q9GZQ4 415 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 TPT1P8Q9HAU6 139 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 KCNE5Q9UJ90 142 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 MKLN1Q9UL63 735 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 PCDHB14Q9Y5E9 798 aa16.94■□□□□ 0.3
TMEM88B-201ENST00000378821 A0A096LPI6 279 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 KIAA0513O60268 411 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 CD53P19397 219 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 CRYGSP22914 178 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 ADH6P28332 368 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 EIF1P41567 113 aaKnown RBP16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF41P51814 821 aaPredicted RBP16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 ARFIP2P53365 341 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 ADAM8P78325 824 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 TXNL4AP83876 142 aaKnown RBP16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 ZNF117Q03924 483 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 SGCBQ16585 318 aa16.93■□□□□ 0.3
TMEM88B-201ENST00000378821 NDUFAF6Q330K2 333 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms