RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 MMP24Q9Y5R2 645 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 IGSF1Q8N6C5 1336 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 ENPP3O14638 875 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 B4GALT5O43286 388 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 BLKP51451 505 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 OR2M3Q8NG83 312 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 UBALD1Q8TB05 177 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 LCN9Q8WX39 176 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 SMPDL3BQ92485 455 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 RAB24Q969Q5 203 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 LRIG1Q96JA1 1093 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 HBEGFQ99075 208 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 NKX3-1Q99801 234 aaPredicted RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
LIG3-202ENST00000378526 SSUH2Q9Y2M2 353 aa8.26□□□□□ -1.09
LIG3-202ENST00000378526 B4DXG7 233 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 SOX1O00570 391 aaPredicted RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 TCF21O43680 179 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CSF3P09919 207 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TGM1P22735 817 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 EFNA3P52797 238 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 PMS2P11Q13670 270 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TESK1Q15569 626 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 RPUSD3Q6P087 351 aaKnown RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 C14orf80Q86SX3 495 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 KCNA7Q96RP8 456 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 DERL2Q9GZP9 239 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 NLRP1Q9C000 1473 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 IL33O95760 270 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 ALPLP05186 524 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TBPP20226 339 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 FCGRTP55899 365 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 ELOBQ15370 118 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 STUMQ69YW2 141 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 OR4F3Q6IEY1 312 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 UNC5DQ6UXZ4 953 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 UBE3DQ7Z6J8 389 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TFAP2CQ92754 450 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 BMFQ96LC9 184 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 LMF1Q96S06 567 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TM6SF2Q9BZW4 377 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CLMPQ9H6B4 373 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 KLK4Q9Y5K2 254 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 A0A1B0GTQ1 180 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 AK1P00568 194 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 VTNP04004 478 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 HOXB5P09067 269 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CCNOP22674 350 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 GCH1P30793 250 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 UBE2G1P62253 170 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 HNRNPDQ14103 355 aaKnown RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 TIGITQ495A1 244 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 DALRD3Q5D0E6 543 aaKnown RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 ADGRG3Q86Y34 549 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 BPIFB2Q8N4F0 458 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 DCBLD1Q8N8Z6 715 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 DTX3Q8N9I9 347 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 PSMG2Q969U7 264 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 MS4A10Q96PG2 267 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 ARNT2Q9HBZ2 717 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 EHFQ9NZC4 300 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TOPBP1Q92547 1522 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CKAP5Q14008 2032 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 UGGT1Q9NYU2 1555 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 ZNF727A8MUV8 499 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 INSIG1O15503 277 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 ITGB5P18084 799 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 RUNX2Q13950 521 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 RCAN2Q14206 197 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 ZNF691Q5VV52 312 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 WDR5BQ86VZ2 330 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 OR52R1Q8NGF1 315 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 OR2G3Q8NGZ4 309 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TMEM74Q96NL1 305 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 PITX2Q99697 317 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 WDR77Q9BQA1 342 aaPredicted RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 SFTPDP35247 375 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 PREPP48147 710 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 MEOX1P50221 254 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 FABP9Q0Z7S8 132 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CNN3Q15417 329 aaKnown RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 CARD17Q5XLA6 110 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 TMEM88Q6PEY1 159 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 DPPA4Q7L190 304 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 OR5AK3PQ8NH89 298 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CD200R1Q8TD46 325 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 CXorf58Q96LI9 332 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 MCHR1Q99705 422 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 NAA11Q9BSU3 229 aaPredicted RBP8.25□□□□□ -1.09
LIG3-202ENST00000378526 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 SPATA31E1Q6ZUB1 1445 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 HIDE1A8MVS5 230 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 KLK1P06870 262 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 C8AP07357 584 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 NQO2P16083 231 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 SOX18P35713 384 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 DIO1P49895 249 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 GPR33Q49SQ1 333 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 C18orf63Q68DL7 685 aa8.25□□□□□ -1.09
LIG3-202ENST00000378526 LEMD1Q68G75 181 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms