RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 ABCD3P28288 659 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 RBM34P42696 430 aaKnown RBP16.23■□□□□ 0.19
CTTN-203ENST00000376561 SLC15A1P46059 708 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 CTBP2P56545 445 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 ST3GAL4Q11206 333 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 SNAPC1Q16533 368 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 PAPD4Q6PIY7 484 aaKnown RBP16.23■□□□□ 0.19
CTTN-203ENST00000376561 LINC00114Q6XXX2 140 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 CDK20Q8IZL9 346 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 STX19Q8N4C7 294 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 FGF11Q92914 225 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 PMEPA1Q969W9 287 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 OMA1Q96E52 524 aa16.23■□□□□ 0.19
CTTN-203ENST00000376561 PPIEQ9UNP9 301 aaKnown RBP16.23■□□□□ 0.19
CTTN-203ENST00000376561 EFCAB10A6NFE3 127 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 UNC119BA6NIH7 251 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 CDX4O14627 284 aaPredicted RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 FUT1P19526 365 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 ACVR2AP27037 513 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 PCSK6P29122 969 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 CCKBRP32239 447 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 COPZ1P61923 177 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 SKP2Q13309 424 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 SLC25A30Q5SVS4 291 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 SYT6Q5T7P8 510 aaPredicted RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 SLC30A6Q6NXT4 461 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 CBLN3Q6UW01 205 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 BCDIN3DQ7Z5W3 292 aaKnown RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 ALDH16A1Q8IZ83 802 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 WDR77Q9BQA1 342 aaPredicted RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 LIN28AQ9H9Z2 209 aaKnown RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 EXOSC3Q9NQT5 275 aaKnown RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 WARS2Q9UGM6 360 aaKnown RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 KIF26BQ2KJY2 2108 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 ZNF264O43296 627 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 OIP5O43482 229 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 GALR2O43603 387 aaPredicted RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 KLK3P07288 261 aaPredicted RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 NGFRP08138 427 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 CD59P13987 128 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 PNLIPRP2P54317 469 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 SF3A2Q15428 464 aaKnown RBP16.22■□□□□ 0.19
CTTN-203ENST00000376561 TMEM205Q6UW68 189 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 HSDL2Q6YN16 418 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 OR4Q3Q8NH05 313 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 TP53INP1Q96A56 240 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 LRR1Q96L50 414 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 LRFN5Q96NI6 719 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 SLC38A2Q96QD8 506 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 LPAR4Q99677 370 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 PRRG3Q9BZD7 231 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 IL20RAQ9UHF4 553 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 CARD8Q9Y2G2 431 aa16.22■□□□□ 0.19
CTTN-203ENST00000376561 H3BMQ9 156 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 GTPBP1O00178 669 aaKnown RBP16.21■□□□□ 0.19
CTTN-203ENST00000376561 TMBIM6P55061 237 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 TBCEQ15813 527 aaPredicted RBP16.21■□□□□ 0.19
CTTN-203ENST00000376561 SYT14P1Q58G82 188 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 MEDAGQ5VYS4 303 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 FAM199XQ6PEV8 388 aaPredicted RBP16.21■□□□□ 0.19
CTTN-203ENST00000376561 CPEB2Q7Z5Q1 589 aaKnown RBP16.21■□□□□ 0.19
CTTN-203ENST00000376561 BRIX1Q8TDN6 353 aaKnown RBP16.21■□□□□ 0.19
CTTN-203ENST00000376561 DNAJA4Q8WW22 397 aaPredicted RBP16.21■□□□□ 0.19
CTTN-203ENST00000376561 SAMD8Q96LT4 415 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 COG8Q96MW5 612 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 CMKLR1Q99788 373 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 ULBP3Q9BZM4 244 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 OR52D1Q9H346 318 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 WDR54Q9H977 334 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 SLC39A1Q9NY26 324 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 WDFY3Q8IZQ1 3526 aa16.21■□□□□ 0.19
CTTN-203ENST00000376561 FAM86C2PA6NEL3 165 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 LCKP06239 509 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 CYC1P08574 325 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 PIPP12273 146 aaPredicted RBP16.21■□□□□ 0.18
CTTN-203ENST00000376561 FXYD6P3P58550 94 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 UBE2UQ5VVX9 321 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 OR2T33Q8NG76 320 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 TMEM163Q8TC26 289 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 VMP1Q96GC9 406 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 FUNDC2Q9BWH2 189 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 RTN4RQ9BZR6 473 aa16.21■□□□□ 0.18
CTTN-203ENST00000376561 NXT1Q9UKK6 140 aaKnown RBP16.21■□□□□ 0.18
CTTN-203ENST00000376561 RPL36Q9Y3U8 105 aaKnown RBP16.21■□□□□ 0.18
CTTN-203ENST00000376561 A0A087WUJ7 227 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.2■□□□□ 0.18
CTTN-203ENST00000376561 B4E171 279 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 TRMUO75648 421 aaKnown RBP16.2■□□□□ 0.18
CTTN-203ENST00000376561 SAGP10523 405 aaPredicted RBP16.2■□□□□ 0.18
CTTN-203ENST00000376561 PSMB9P28065 219 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 TSPAN7P41732 249 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 CCR4P51679 360 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 PSPHP78330 225 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 PGGHGQ32M88 737 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 TMCO5AQ8N6Q1 288 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 FANK1Q8TC84 345 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 FCGR1BQ92637 280 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 MR1Q95460 341 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 C3orf49Q96BT1 292 aa16.2■□□□□ 0.18
CTTN-203ENST00000376561 C8orf44Q96CB5 159 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms