RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 ADH6P28332 368 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 CPA2P48052 419 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 MVDP53602 400 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 CARD18P57730 90 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 SKP2Q13309 424 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 CBFBQ13951 182 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 FGFBP1Q14512 234 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 QPRTQ15274 297 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 TMEM176BQ3YBM2 270 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-203ENST00000376490 GTDC1Q4AE62 458 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 TIGD2Q4W5G0 525 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 HBMQ6B0K9 141 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 ESPNLQ6ZVH7 1005 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 EIF3MQ7L2H7 374 aaKnown RBP12.79□□□□□ -0.36
CLCN6-203ENST00000376490 TMEM200AQ86VY9 491 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 LURAP1LQ8IV03 231 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 ZNF619Q8N2I2 560 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 OR2V1Q8NHB1 315 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 THOC1Q96FV9 657 aaKnown RBP12.79□□□□□ -0.36
CLCN6-203ENST00000376490 ITCHQ96J02 903 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 QRSL1Q9H0R6 528 aaKnown RBP12.79□□□□□ -0.36
CLCN6-203ENST00000376490 OPN3Q9H1Y3 402 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-203ENST00000376490 LIPT1Q9Y234 373 aa12.79□□□□□ -0.36
CLCN6-203ENST00000376490 TUBAL3A6NHL2 446 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 CLDN24A6NM45 220 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 DNAJA2O60884 412 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 CTAG2O75638 210 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 SYNGR4O95473 234 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 NTN1O95631 604 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 CGAP01215 116 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 CHRM4P08173 479 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 ZCCHC18P0CG32 403 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 PGM1P36871 562 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 PEX19P40855 299 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 KCNJ10P78508 379 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 SLC25A53Q5H9E4 307 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 FUNDC1Q8IVP5 155 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 ZNF610Q8N9Z0 462 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 ROBO4Q8WZ75 1007 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 GTF2H4Q92759 462 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 AURKBQ96GD4 344 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-203ENST00000376490 MRGPRX4Q96LA9 322 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 KLHL15Q96M94 604 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 TRNT1Q96Q11 434 aaKnown RBP12.78□□□□□ -0.36
CLCN6-203ENST00000376490 CCDC28BQ9BUN5 200 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 SLC38A1Q9H2H9 487 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 RMND5AQ9H871 391 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-203ENST00000376490 CLEC4AQ9UMR7 237 aa12.78□□□□□ -0.36
CLCN6-203ENST00000376490 ANKHD1Q8IWZ3 2542 aaKnown RBP12.78□□□□□ -0.36
CLCN6-203ENST00000376490 MSTNO14793 375 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 NR2F1P10589 423 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 EPXP11678 715 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ETFAP13804 333 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 CD1EP15812 388 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ELK4P28324 431 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 RYKP34925 604 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 CRATP43155 626 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 MRPL19P49406 292 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ANXA11P50995 505 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 SESN3P58005 492 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 STX1BP61266 288 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 TXNL4AP83876 142 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 HPCAP84074 193 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 PLAURQ03405 335 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 FAM27E3Q08E93 113 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 GUSBP1Q15486 140 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 MAPK11Q15759 364 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 C6orf10Q5SRN2 563 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ZNF474Q6S9Z5 364 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 LRRC74BQ6ZQY2 392 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 MSANTD1Q6ZTZ1 278 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 FAM222BQ8WU58 562 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 CNOT9Q92600 299 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 PAIP1Q9H074 479 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 MTHFD2LQ9H903 347 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 TPT1P8Q9HAU6 139 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 DNAJB12Q9NXW2 375 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.37
CLCN6-203ENST00000376490 SLC35A3Q9Y2D2 325 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 ABCA4P78363 2273 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 AKAP6Q13023 2319 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 SPG11Q96JI7 2443 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 MYO9AB2RTY4 2548 aa12.77□□□□□ -0.37
CLCN6-203ENST00000376490 A0A1W2PNR3 127 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 FAM221AA4D161 298 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 AGAP5A6NIR3 686 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 ETV2O00321 342 aaPredicted RBP12.76□□□□□ -0.37
CLCN6-203ENST00000376490 FCGR2AP12318 317 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 PGCP20142 388 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 CPOXP36551 454 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 SORDQ00796 357 aa12.76□□□□□ -0.37
CLCN6-203ENST00000376490 DAZAP2Q15038 168 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms