RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 OR2A1Q8NGT9 310 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 SFXN5Q8TD22 340 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 KISS1RQ969F8 398 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 OR2M2Q96R28 347 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 FBXL4Q9UKA2 621 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 CES1P1Q9UKY3 287 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 OR7A10O76100 309 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 HPXP02790 462 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 NOS3P29474 1203 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 SOX9P48436 509 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 BDH1Q02338 343 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 SNTA1Q13424 505 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 GALEQ14376 348 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 ZSWIM7Q19AV6 140 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 GSG1Q2KHT4 349 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 FNDC3BQ53EP0 1204 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 ACSM3Q53FZ2 586 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 GPR139Q6DWJ6 353 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 ABHD17CQ6PCB6 329 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 ZNF765Q7L2R6 523 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 GJD3Q8N144 294 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 THAP4Q8WY91 577 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 CDS1Q92903 461 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 PCBD2Q9H0N5 130 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 ANKRD19PQ9H560 264 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 TRPV4Q9HBA0 871 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
CLCNKA-202ENST00000375692 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 UNC119BA6NIH7 251 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SOX1O00570 391 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SSNA1O43805 119 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 WNT1P04628 370 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GYPBP06028 91 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 H2AFB2P0C5Z0 115 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC35G4P0C7Q5 338 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GKN3PP0CG01 181 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 UBL4AP11441 157 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 F3P13726 295 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 DNASE1P24855 282 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 HCCSP53701 268 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 CCNJQ5T5M9 372 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 PRPF38BQ5VTL8 546 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SLC48A1Q6P1K1 146 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 FAM111BQ6SJ93 734 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 BPHLQ86WA6 291 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GID4Q8IVV7 300 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 CYB561A3Q8NBI2 242 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 ADAMTS15Q8TE58 950 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 DLL4Q9NR61 685 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 ZNF443Q9Y2A4 671 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 A8MUA0 341 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 MT-ND5P03915 603 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 IL9P15248 144 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 ATF1P18846 271 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GDI1P31150 447 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 MPIP34949 423 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SNRPNP63162 240 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SHC2P98077 582 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 COL28A1Q2UY09 1125 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 FRRS1Q6ZNA5 592 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 FANK1Q8TC84 345 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GHSRQ92847 366 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 RBP7Q96R05 134 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 TEAD3Q99594 435 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 C1QTNF2Q9BXJ5 285 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 SIDT1Q9NXL6 827 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 ZNF224Q9NZL3 707 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 FLVCR2Q9UPI3 526 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 DOCK9Q9BZ29 2069 aa13.09□□□□□ -0.31
CLCNKA-202ENST00000375692 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 BHLHE40O14503 412 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 CDK2AP1O14519 115 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 PLPP2O43688 288 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 OR5F1O95221 314 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 HRGP04196 525 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 RPN2P04844 631 aa13.08□□□□□ -0.32
CLCNKA-202ENST00000375692 PYCR1P32322 319 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms