RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SCP2D1Q9UJQ7 156 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 WDR81Q562E7 1941 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SELENOFO60613 162 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 RBMXL2O75526 392 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 APEHP13798 732 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 DDOSTP39656 456 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SNU13P55769 128 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 CTXN1P60606 82 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 MAT1AQ00266 395 aaKnown RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 FGL2Q14314 439 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 SFXN4Q6P4A7 337 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 LRRC28Q86X40 367 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-202ENST00000375340 MSRB3Q8IXL7 192 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 APH1BQ8WW43 257 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF566Q969W8 418 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 NXPE3Q969Y0 559 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 METTL7AQ9H8H3 244 aa6.12□□□□□ -1.43
SMC1A-202ENST00000375340 A0A0G2JMP0 313 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 A0A1B0GVI7 797 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 HOXC11O43248 304 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 H2BFMP0C1H6 154 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 SNRPGP62308 76 aaKnown RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PLCXD2Q0VAA5 305 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 SYT14P1Q58G82 188 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ULK3Q6PHR2 472 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 GDPGP1Q6ZNW5 385 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 OR4M2Q8NGB6 313 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 OR6T1Q8NGN1 323 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 OR13C5Q8NGS8 318 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 FAM46BQ96A09 425 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 C20orf85Q9H1P6 137 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CLDND1Q9NY35 253 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PATJQ8NI35 1801 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ARSBP15848 533 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 NPPBP16860 134 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 HMGA1P17096 107 aaKnown RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 MMP11P24347 488 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 GRK5P34947 590 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 GLT8D1Q68CQ7 371 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 AMDHD1Q96NU7 426 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CHST8Q9H2A9 424 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 A0A0A6YYH2 397 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 METTL21EPA6NDL7 271 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 A6NJ64 397 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ACOD1A6NK06 481 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PLPP1O14494 284 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ICMTO60725 284 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 GALK2Q01415 458 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CHRFAM7AQ494W8 412 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PNLDC1Q8NA58 520 aaKnown RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 TSTD1Q8NFU3 115 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 NPRL2Q8WTW4 380 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 LINC01599Q8WXQ3 324 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ULBP3Q9BZM4 244 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 SDC3O75056 442 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 LIM2P55344 173 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 B4GALNT1Q00973 533 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 BTN1A1Q13410 526 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM99Q8N816 258 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 SMARCD2Q92925 531 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 TSNAXQ99598 290 aaKnown RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 MAFFQ9ULX9 164 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 GPR34Q9UPC5 381 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 LCTP09848 1927 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 M0R082 166 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PRR35P0CG20 571 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 S1PR1P21453 382 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 HIST1H1TP22492 207 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 BAK1Q16611 211 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 OR14A2Q96R54 314 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CD93Q9NPY3 652 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ACTR10Q9NZ32 417 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 BRCA1P38398 1863 aaKnown RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 PRSS38A1L453 326 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CPED1A4D0V7 1026 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 F5H0A9 414 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 F11P03951 625 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 VEGFCP49767 419 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 COL28A1Q2UY09 1125 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ALG10Q5BKT4 473 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 TTLL10Q6ZVT0 673 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 RAB7BQ96AH8 199 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 TMEM38AQ9H6F2 299 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 NEU3Q9UQ49 428 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF780AO75290 641 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CTSLP07711 333 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CPMP14384 443 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 CPEP16870 476 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 GPX2P18283 190 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 VASPP50552 380 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 RRAS2P62070 204 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 UBXN2BQ14CS0 331 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 LRFN4Q6PJG9 635 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 MBOAT2Q6ZWT7 520 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 KCTD20Q7Z5Y7 419 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 RASGRP3Q8IV61 690 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 MFSD9Q8NBP5 474 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 DVL3Q92997 716 aaPredicted RBP6.11□□□□□ -1.43
SMC1A-202ENST00000375340 NEURL2Q9BR09 285 aa6.11□□□□□ -1.43
SMC1A-202ENST00000375340 ISG20L2Q9H9L3 353 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms