RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MRPS18AQ9NVS2 196 aaKnown RBP11.32□□□□□ -0.6
C9orf3-203ENST00000375315 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 SLC27A6Q9Y2P4 619 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 A0A1B0GUH1 482 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 HMSDA8MTL9 139 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 FAAHO00519 579 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 TSPAN6O43657 245 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 P2RY2P41231 377 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 NSG1P42857 185 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 PSMD4P55036 377 aaKnown RBP11.32□□□□□ -0.6
C9orf3-203ENST00000375315 TFF2Q03403 129 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 CERS6Q6ZMG9 384 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 OR10K1Q8NGX5 313 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 ELP4Q96EB1 424 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 P2RY12Q9H244 342 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 ANKRD19PQ9H560 264 aa11.32□□□□□ -0.6
C9orf3-203ENST00000375315 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3DA0A087WVF3 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3IA0A087WXS9 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3EA0A087X179 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3KA0A087X1G2 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 PMS2P1A4D2B8 440 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3FA6NER0 549 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3LB9A6J9 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 LRRN3E7EW58 273 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 NPIPB8E9PQR5 432 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 H7C0S8 307 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 YY2O15391 372 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 PRODHO43272 600 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GATBO75879 557 aaKnown RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 HIST1H2ABP04908 130 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3HP0C7X1 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GALP22466 123 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 STARP49675 285 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 MMP15P51511 669 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 CDK6Q00534 326 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 CRB2Q5IJ48 1285 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3GQ6DHY5 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 OR5M10Q6IEU7 315 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3CQ6IPX1 549 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 HIST3H2AQ7L7L0 130 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 RD3Q7Z3Z2 195 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D3Q8IZP1 549 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GNPDA2Q8TDQ7 276 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 CXorf40AQ8TE69 158 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 HIST1H2ACQ93077 130 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 FUZQ9BT04 418 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 LRRN3Q9H3W5 708 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 KCNK12Q9HB15 430 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 KCND3Q9UK17 655 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 SLC22A7Q9Y694 548 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 UBL3O95164 117 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 LIMS3P0CW19 117 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 LIMS4P0CW20 117 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 PDHA2P29803 388 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 MTNR1AP48039 350 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 VEGFCP49767 419 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 INSL4Q14641 139 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GGTA1PQ4G0N0 100 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 SYTL3Q4VX76 610 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF660Q6AZW8 331 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 CFAP206Q8IYR0 622 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 BMPERQ8N8U9 685 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 FAIM2Q9BWQ8 316 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 SLC32A1Q9H598 525 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ARL15Q9NXU5 204 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 NTMQ9P121 344 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ANGPT4Q9Y264 503 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 RASD1Q9Y272 281 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 WDFY4Q6ZS81 3184 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 RGS9O75916 674 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ANXA5P08758 320 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 CPN1P15169 458 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF3P17036 446 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GAS1P54826 345 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 CASP9P55211 416 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 DGCR2P98153 550 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM115Q12893 351 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 SNTB1Q13884 538 aaKnown RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GINS1Q14691 196 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF124Q15973 351 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 FAM69AQ5T7M9 428 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 SLC36A4Q6YBV0 504 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 LHFPL3Q86UP9 236 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TRMT10AQ8TBZ6 339 aaKnown RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 GPN1Q9HCN4 374 aaPredicted RBP11.31□□□□□ -0.6
C9orf3-203ENST00000375315 SDHAF3Q9NRP4 125 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 TM7SF3Q9NS93 570 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF69Q9UC07 566 aa11.31□□□□□ -0.6
C9orf3-203ENST00000375315 FXYD6-FXYD2A0A087WZ82 144 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 TTLL8A6PVC2 850 aa11.3□□□□□ -0.6
C9orf3-203ENST00000375315 SCAMP2O15127 329 aaKnown RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CDC123O75794 336 aaPredicted RBP11.3□□□□□ -0.6
C9orf3-203ENST00000375315 CBSLP0DN79 551 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms