RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 LILRA2Q8N149 483 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OR6N1Q8NGY5 312 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 NEURL3Q96EH8 262 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF583Q96ND8 569 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OR2M4Q96R27 311 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 K7EPK0 472 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 HPGDSO60760 199 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 KCNK5O95279 499 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 ACVR1BP36896 505 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 PCK2Q16822 640 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 MISPQ8IVT2 679 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 FAM71E2Q8N5Q1 922 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 NETO2Q8NC67 525 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OR6C2Q9NZP2 312 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 FIBINQ8TAL6 211 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 DUSP19Q8WTR2 217 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 WDFY2Q96P53 400 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 MED6O75586 246 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM31Q5JXX7 168 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 B4GALT6Q9UBX8 382 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 GMEB2Q9UKD1 530 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SELENOVP59797 346 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 LAPTM4AQ15012 233 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 FAM26EQ8N5C1 309 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OR9A4Q8NGU2 314 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SYT7O43581 403 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 AQP8O94778 261 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 ACVRL1P37023 503 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 UBE2MP61081 183 aaKnown RBP9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SLC35G1Q2M3R5 365 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SFRP4Q6FHJ7 346 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-204ENST00000375290 CPOQ8IVL8 374 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 KCT2Q8NC54 265 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 SEMA6DQ8NFY4 1073 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OR4K17Q8NGC6 315 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 INSL5Q9Y5Q6 135 aa9.58□□□□□ -0.88
PTCH1-204ENST00000375290 OLFM2O95897 454 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 GNRHRP30968 328 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 APOOLQ6UXV4 268 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 MBOAT2Q6ZWT7 520 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ERN2Q76MJ5 926 aaKnown RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SH3RF2Q8TEC5 729 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ARMC5Q96C12 935 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 TMEM43Q9BTV4 400 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 OR52D1Q9H346 318 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 CARS2Q9HA77 564 aaKnown RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 B4GALT7Q9UBV7 327 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF35P13682 527 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SNRPD2P62316 118 aaKnown RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 PSRC1Q6PGN9 363 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ACOT7LQ6ZUV0 252 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 DYNC2LI1Q8TCX1 351 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LRRC15Q8TF66 581 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SPRYD4Q8WW59 207 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LIN37Q96GY3 246 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 PCDHB10Q9UN67 800 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 FUCA1P04066 466 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 MGMTP16455 207 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 HSD17B7P56937 341 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF695Q8IW36 515 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LAX1Q8IWV1 398 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 CLRN3Q8NCR9 226 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 OR6C4Q8NGE1 309 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 TRMT2BQ96GJ1 504 aaKnown RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 DMRT3Q9NQL9 472 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 RGPD2P0DJD1 1756 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 DRD5P21918 477 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 PSAPL1Q6NUJ1 521 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 FUNDC1Q8IVP5 155 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 NPWQ8N729 165 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 BPIFA2Q96DR5 249 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 BET1O15155 118 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 RAC2P15153 192 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 MAN2A2P49641 1150 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 STK19P49842 368 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 DBPQ10586 325 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 EMC4Q5J8M3 183 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 MANEAQ5SRI9 462 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 NANOGP1Q8N7R0 232 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ASB11Q8WXH4 323 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF275Q9NSD4 429 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-204ENST00000375290 RHCGQ9UBD6 479 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 IL34Q6ZMJ4 242 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SLC22A8Q8TCC7 542 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 CHAC2Q8WUX2 184 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 RAB8BQ92930 207 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ZCCHC4Q9H5U6 513 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 LILRB3O75022 631 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ADH7P40394 386 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 HBA1P69905 142 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 EOGTQ5NDL2 527 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 NADSYN1Q6IA69 706 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 WDR5BQ86VZ2 330 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 ZNF561Q8N587 486 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 OR52E2Q8NGJ4 325 aa9.57□□□□□ -0.88
PTCH1-204ENST00000375290 SAMD11Q96NU1 681 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms