RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ALG8Q9BVK2 526 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 TMED9Q9BVK6 235 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 NDEL1Q9GZM8 345 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 Q9N2J8 555 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 GPR27Q9NS67 375 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 POMT2Q9UKY4 750 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 NTNG1Q9Y2I2 539 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 PCDHGB7Q9Y5F8 929 aa11.32□□□□□ -0.6
UBR4-203ENST00000375225 EML5Q05BV3 1969 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SCN3AQ9NY46 2000 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 C12orf71A8MTZ7 269 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 K7ESF4 209 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SEC14L5O43304 696 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 RNF13O43567 381 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 PRAMEF2O60811 474 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 APOL3O95236 402 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SERPINA3P01011 423 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 THY1P04216 161 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SPNP16150 400 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 HTR2AP28223 471 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 CD38P28907 300 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 NOS3P29474 1203 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 TALDO1P37837 337 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 RACK1P63244 317 aaKnown RBP11.31□□□□□ -0.6
UBR4-203ENST00000375225 ID2Q02363 134 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SELENBP1Q13228 472 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SHFQ7M4L6 423 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 TPRA1Q86W33 373 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 OR6C4Q8NGE1 309 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 ENKURQ8TC29 256 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 SLC37A2Q8TED4 501 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 NACC2Q96BF6 587 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 DGAT2Q96PD7 388 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 TM9SF2Q99805 663 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 ORAI3Q9BRQ5 295 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.31□□□□□ -0.6
UBR4-203ENST00000375225 RERGLQ9H628 205 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 MKKSQ9NPJ1 570 aaPredicted RBP11.31□□□□□ -0.6
UBR4-203ENST00000375225 HAO2Q9NYQ3 351 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
UBR4-203ENST00000375225 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 CCDC163A0A0D9SF12 145 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 A0A1B0GX12 115 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 A0A1W2PQ09 198 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 CDC42EP2O14613 210 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 SLC2A2P11168 524 aaPredicted RBP11.3□□□□□ -0.6
UBR4-203ENST00000375225 HOXA6P31267 233 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ACTA2P62736 377 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ACTG2P63267 376 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 DAB2P98082 770 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 FOXK2Q01167 660 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 EIF2B5Q13144 721 aaKnown RBP11.3□□□□□ -0.6
UBR4-203ENST00000375225 RIN1Q13671 783 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 DOC2BQ14184 412 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 FZD2Q14332 565 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 QPRTQ15274 297 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ZNF79Q15937 498 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 MAPK14Q16539 360 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 KLHL12Q53G59 568 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ULK3Q6PHR2 472 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 FIGNL1Q6PIW4 674 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 OAFQ86UD1 273 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 KLBQ86Z14 1044 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 DEFB119Q8N690 84 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ARIH2OSQ8N7S6 290 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ZNF614Q8N883 585 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 LSMEM1Q8N8F7 131 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 EDAQ92838 391 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 RIT1Q92963 219 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 ANKRD9Q96BM1 317 aaPredicted RBP11.3□□□□□ -0.6
UBR4-203ENST00000375225 TCTN2Q96GX1 697 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 HSPA12BQ96MM6 686 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 MIR1-1HGQ9H1L0 117 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 UCK1Q9HA47 277 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 FOLH1BQ9HBA9 442 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 SACM1LQ9NTJ5 587 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 PRODH2Q9UF12 536 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 NOX1Q9Y5S8 564 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 HMX3A6NHT5 357 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 EFCAB7A8K855 629 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 J3QRE1 110 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 SGK494L7N484 410 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 GTPBP1O00178 669 aaKnown RBP11.3□□□□□ -0.6
UBR4-203ENST00000375225 PEX12O00623 359 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 SOCS6O14544 535 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 CTNSO60931 367 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 TRIM3O75382 744 aaPredicted RBP11.3□□□□□ -0.6
UBR4-203ENST00000375225 RDH16O75452 317 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 GKN3PP0CG01 181 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 PEPDP12955 493 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 PVRP15151 417 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 MAKP20794 623 aa11.3□□□□□ -0.6
UBR4-203ENST00000375225 AZGP1P25311 298 aaKnown RBP11.3□□□□□ -0.6
UBR4-203ENST00000375225 GALNSP34059 522 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms