RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 STEAP4Q687X5 459 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 FNDC9Q8TBE3 224 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 CRYGNQ8WXF5 182 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 UBXN10Q96LJ8 280 aa13.45□□□□□ -0.26
TRAF1-201ENST00000373887 NMNAT1Q9HAN9 279 aaPredicted RBP13.45□□□□□ -0.26
TRAF1-201ENST00000373887 PIGBOS1A0A0B4J2F0 54 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF28P17035 718 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SSTR2P30874 369 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MC3RP41968 323 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MAGEB1P43366 347 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MAT1AQ00266 395 aaKnown RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 RABEPKQ7Z6M1 372 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 NT5C3BQ969T7 300 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 PBX4Q9BYU1 374 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MAGIXQ9H6Y5 334 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 USP36Q9P275 1121 aaKnown RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 PCDHB10Q9UN67 800 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 CSNK1G3Q9Y6M4 447 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 LPLP06858 475 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 GGT1P19440 569 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 RPL23AP62750 156 aaKnown RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SH3BP2P78314 561 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SLC7A9P82251 487 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 TAP2Q03519 686 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 NADSYN1Q6IA69 706 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF585AQ6P3V2 769 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 FAM234AQ9H0X4 552 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 GDF1P27539 372 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 PLCXD3Q63HM9 321 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MFSD6LQ8IWD5 586 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 RNF175Q8N4F7 328 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 TRIB3Q96RU7 358 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SLA2Q9H6Q3 261 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 GAREM1Q9H706 876 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 GPN2Q9H9Y4 310 aaPredicted RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 TRBV11-1A0A0K0K1C0 115 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 ANKRD30BLA7E2S9 258 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 POM121CA8CG34 1229 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF736B4DX44 427 aaPredicted RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 CRYZL1O95825 349 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 HIST2H3PS2Q5TEC6 136 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 DESI1Q6ICB0 168 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 PDZD3Q86UT5 571 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 KLHDC9Q8NEP7 349 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SPPL3Q8TCT6 385 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MSI2Q96DH6 328 aaKnown RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SFXN2Q96NB2 322 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SERINC2Q96SA4 455 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SPIN2AQ99865 258 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SPIN2BQ9BPZ2 258 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SLC6A5Q9Y345 797 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 AKAIN1P0CW23 69 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 LAMP1P11279 417 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SERPINA2P20848 420 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 PRKACBP22694 351 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 GABRA2P47869 451 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 HLCSP50747 726 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 HNF4GQ14541 408 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 OR7A5Q15622 319 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 TRIM61Q5EBN2 209 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 METTL11BQ5VVY1 283 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 LANCL3Q6ZV70 420 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 MS4A15Q8N5U1 240 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 CNEP1R1Q8N9A8 125 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 GTF2H4Q92759 462 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 NEIL2Q969S2 332 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 SLC45A3Q96JT2 553 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 RABL2AQ9UBK7 228 aaPredicted RBP13.44□□□□□ -0.26
TRAF1-201ENST00000373887 RABL2BQ9UNT1 228 aa13.44□□□□□ -0.26
TRAF1-201ENST00000373887 TLE1Q04724 770 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ZNF439Q8NDP4 499 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 OR4K5Q8NGD3 323 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 BIRC8Q96P09 236 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 MFFQ9GZY8 342 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ACOT13Q9NPJ3 140 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 NUBP2Q9Y5Y2 271 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 GJE1A6NN92 205 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 PRAMEF2O60811 474 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 DRD2P14416 443 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 CYCSP99999 105 aaKnown RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 TMEM135Q86UB9 458 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 OR51D1Q8NGF3 324 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 SFXN5Q8TD22 340 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 MRPL38Q96DV4 380 aaKnown RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 BMFQ96LC9 184 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 NME7Q9Y5B8 376 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 CBX7O95931 251 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 TPT1P13693 172 aaKnown RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 RPS18P62269 152 aaKnown RBP13.43□□□□□ -0.26
TRAF1-201ENST00000373887 SLC14A1Q13336 389 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 CEACAM7Q14002 265 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ZFAND2BQ8WV99 257 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 SNAPC3Q92966 411 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 TXN2Q99757 166 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 ZBP1Q9H171 429 aa13.43□□□□□ -0.26
TRAF1-201ENST00000373887 SLC38A1Q9H2H9 487 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms